RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 KRT9P35527 623 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 LETM2Q2VYF4 491 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 ANKRD20A12PQ8NF67 263 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 NYXQ9GZU5 481 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 PCDHA4Q9UN74 947 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 CYTH3O43739 400 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 ERCC3P19447 782 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 ERVK-24P63145 666 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 PARD6BQ9BYG5 372 aa18.33■□□□□ 0.52
TRIM27-202ENST00000377199 ZCCHC17Q9NP64 241 aaKnown RBP18.33■□□□□ 0.52
TRIM27-202ENST00000377199 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
TRIM27-202ENST00000377199 CALML3P27482 149 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 GABPB1Q06547 395 aaPredicted RBP18.32■□□□□ 0.52
TRIM27-202ENST00000377199 SLC35G1Q2M3R5 365 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 TCP11X2Q5H9J9 407 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 C12orf60Q5U649 245 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 CNGA4Q8IV77 575 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 SLC35F6Q8N357 371 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
TRIM27-202ENST00000377199 SEMA3EO15041 775 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 PLA2G4AP47712 749 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 ARHGEF1Q92888 912 aaKnown RBP18.32■□□□□ 0.52
TRIM27-202ENST00000377199 TRIM47Q96LD4 638 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 CHP1Q99653 195 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 DISC1Q9NRI5 854 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 TRIM10Q9UDY6 481 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
TRIM27-202ENST00000377199 PBX1P40424 430 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 ZNF658Q5TYW1 1059 aaPredicted RBP18.31■□□□□ 0.52
TRIM27-202ENST00000377199 USP17L2Q6R6M4 530 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 AMOTL1Q8IY63 956 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 ABHD10Q9NUJ1 306 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 MAD2L2Q9UI95 211 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 RTCBQ9Y3I0 505 aaKnown RBP18.31■□□□□ 0.52
TRIM27-202ENST00000377199 SASH3O75995 380 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 RWDD2AQ9UIY3 292 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
TRIM27-202ENST00000377199 CCNT1O60563 726 aaKnown RBP18.3■□□□□ 0.52
TRIM27-202ENST00000377199 NAPAP54920 295 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 GOLGA1Q92805 767 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 HPS3Q969F9 1004 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 UIMC1Q96RL1 719 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 GUCA1BQ9UMX6 200 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 RHOXF2BP0C7M4 288 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 TRAPPC10P48553 1259 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 EIF6P56537 245 aaKnown RBP18.3■□□□□ 0.52
TRIM27-202ENST00000377199 CHMP4BP1P59074 171 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 PCMTD1Q96MG8 357 aaPredicted RBP18.3■□□□□ 0.52
TRIM27-202ENST00000377199 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 RHOXF2Q9BQY4 288 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 SLC10A5Q5PT55 438 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 C4orf32Q8N8J7 132 aa18.3■□□□□ 0.52
TRIM27-202ENST00000377199 KLRF2D3W0D1 207 aa18.29■□□□□ 0.52
TRIM27-202ENST00000377199 PARP1P09874 1014 aaKnown RBP18.29■□□□□ 0.52
TRIM27-202ENST00000377199 RFC4P35249 363 aa18.29■□□□□ 0.52
TRIM27-202ENST00000377199 LONP1P36776 959 aaKnown RBP18.29■□□□□ 0.52
TRIM27-202ENST00000377199 NAALADL2Q58DX5 795 aa18.29■□□□□ 0.52
TRIM27-202ENST00000377199 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
TRIM27-202ENST00000377199 GYS2P54840 703 aa18.29■□□□□ 0.52
TRIM27-202ENST00000377199 SBK1Q52WX2 424 aa18.29■□□□□ 0.52
TRIM27-202ENST00000377199 CC2D1AQ6P1N0 951 aaPredicted RBP18.29■□□□□ 0.52
TRIM27-202ENST00000377199 RMND1Q9NWS8 449 aa18.29■□□□□ 0.52
TRIM27-202ENST00000377199 ENC1O14682 589 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 ZRANB2O95218 330 aaKnown RBP eCLIP18.28■□□□□ 0.521e-9■□□□□ 8.9
TRIM27-202ENST00000377199 JAKMIP3Q5VZ66 844 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 LRRC15Q8TF66 581 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 BAG3O95817 575 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 TM4SF1P30408 202 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 TECP42680 631 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 DGKHQ86XP1 1220 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 GPR161Q8N6U8 529 aaKnown RBP18.28■□□□□ 0.52
TRIM27-202ENST00000377199 NAA15Q9BXJ9 866 aaKnown RBP18.28■□□□□ 0.52
TRIM27-202ENST00000377199 ARFGAP3Q9NP61 516 aa18.28■□□□□ 0.52
TRIM27-202ENST00000377199 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 CTAGE9A4FU28 777 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 B4DLN1 442 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 RPS6KA4O75676 772 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 KIF20AO95235 890 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 KLK7P49862 253 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 LIMA1Q9UHB6 759 aaKnown RBP18.27■□□□□ 0.52
TRIM27-202ENST00000377199 F8W031 263 aaPredicted RBP18.27■□□□□ 0.52
TRIM27-202ENST00000377199 BTDP43251 543 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 MCM6Q14566 821 aa18.27■□□□□ 0.52
TRIM27-202ENST00000377199 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
TRIM27-202ENST00000377199 FRMPD2Q68DX3 1309 aaPredicted RBP18.27■□□□□ 0.52
TRIM27-202ENST00000377199 A0A1B0GUL6 1792 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 TBC1D8O95759 1140 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 PLCG1P19174 1290 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 PICALMQ13492 652 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 GRM4Q14833 912 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 TXNRD1Q16881 649 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 ARL6IP4Q66PJ3 421 aaKnown RBP18.27■□□□□ 0.51
TRIM27-202ENST00000377199 IRF2BP1Q8IU81 584 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 EYA3Q99504 573 aa18.27■□□□□ 0.51
TRIM27-202ENST00000377199 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms