RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 PTCH2Q9Y6C5 1203 aa12.69□□□□□ -0.38
UBD-203ENST00000377050 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
UBD-203ENST00000377050 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 DEXIO95424 95 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 PTPREP23469 700 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 CDC27P30260 824 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 KRBA2Q6ZNG9 492 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 TRIM22Q8IYM9 498 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 KRI1Q8N9T8 703 aaKnown RBP12.68□□□□□ -0.38
UBD-203ENST00000377050 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 WNK4Q96J92 1243 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 GMLQ99445 158 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 NAPBQ9H115 298 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 PRO3102Q9H379 93 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 IFNKQ9P0W0 207 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 GGA1Q9UJY5 639 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 A0A0C4DFX4 3053 aa12.68□□□□□ -0.38
UBD-203ENST00000377050 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 B4E1Z4 1266 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 PPP1R12BO60237 982 aaPredicted RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 RANBP6O60518 1105 aaKnown RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 IDH1O75874 414 aaKnown RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 SLU7O95391 586 aaKnown RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 BMP15O95972 392 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 MMP1P03956 469 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 MMP14P50281 582 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 SF3B3Q15393 1217 aaKnown RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 ARMCX5Q6P1M9 558 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 MFSD6Q6ZSS7 791 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 NOSTRINQ8IVI9 506 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 ZNF397Q8NF99 534 aaPredicted RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 CCDC34Q96HJ3 373 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 SRRTQ9BXP5 876 aaKnown RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 HSD3B7Q9H2F3 369 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
UBD-203ENST00000377050 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 COL6A3P12111 3177 aa12.67□□□□□ -0.38
UBD-203ENST00000377050 COL1A1P02452 1464 aaPredicted RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 PHLPP2Q6ZVD8 1323 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 WTIPA6NIX2 430 aaPredicted RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 WNT10BO00744 389 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 IFIT3O14879 490 aaKnown RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 SMC2O95347 1197 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 APPP05067 770 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 SARSP49591 514 aaKnown RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 RPS8P62241 208 aaKnown RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 MDM2Q00987 491 aaPredicted RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 RTN1Q16799 776 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 E4F1Q66K89 784 aaPredicted RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 TMC6Q7Z403 805 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 PODNQ7Z5L7 613 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 VSTM4Q8IW00 320 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 ENOX1Q8TC92 643 aaKnown RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
UBD-203ENST00000377050 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 KCNH3Q9ULD8 1083 aa12.66□□□□□ -0.38
UBD-203ENST00000377050 PDS5AQ29RF7 1337 aaKnown RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 ERICH2A1L162 156 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 MBD4O95243 580 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 FGRP09769 529 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 ERCC5P28715 1186 aaPredicted RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 DMTNQ08495 405 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 KIF22Q14807 665 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 ARID5BQ14865 1188 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 WTAPQ15007 396 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 METTL16Q86W50 562 aaKnown RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 MAGEB6Q8N7X4 407 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 CNNM3Q8NE01 707 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 TSC1Q92574 1164 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 PPP1R13BQ96KQ4 1090 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 FAM53CQ9NYF3 392 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 FBXO2Q9UK22 296 aaPredicted RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
UBD-203ENST00000377050 SRPRBQ9Y5M8 271 aaKnown RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 RANBP2P49792 3224 aaKnown RBP12.65□□□□□ -0.38
UBD-203ENST00000377050 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 USP27XA6NNY8 438 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 SOX1O00570 391 aaPredicted RBP12.64□□□□□ -0.39
UBD-203ENST00000377050 ZSCAN12O43309 604 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms