RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 DEPDC7Q96QD5 511 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 CHMP4BQ9H444 224 aaKnown RBP6.93□□□□□ -1.3
SSX1-201ENST00000376919 BICC1Q9H694 974 aaKnown RBP6.93□□□□□ -1.3
SSX1-201ENST00000376919 GREM2Q9H772 168 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 SPC25Q9HBM1 224 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 TIMMDC1Q9NPL8 285 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 CNNM1Q9NRU3 951 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 SNTG2Q9NY99 539 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 RNF181Q9P0P0 153 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 ANKIB1Q9P2G1 1089 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 ADAMTS1Q9UHI8 967 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 TNNQ9UQP3 1299 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 EFR3BQ9Y2G0 817 aa6.93□□□□□ -1.3
SSX1-201ENST00000376919 A0A1B0GUL6 1792 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 KLRG2A4D1S0 409 aaPredicted RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 PPP1R12AO14974 1030 aaPredicted RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 KLF4O43474 513 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 BBOX1O75936 387 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 GNAI2P04899 355 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 YY1P25490 414 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 MSX1P28360 303 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 HOXA10P31260 410 aaPredicted RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 ETFBP38117 255 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 SOX9P48436 509 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 IDH3AP50213 366 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 RPS8P62241 208 aaKnown RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 RASA3Q14644 834 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 INTS3Q68E01 1043 aaKnown RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 GALNT12Q8IXK2 581 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 TTLL11Q8NHH1 800 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 CELF1Q92879 486 aaKnown RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 KLRG1Q96E93 195 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 SUSD3Q96L08 255 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 ZIC5Q96T25 663 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 MEIS3Q99687 375 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 PLA2G12BQ9BX93 195 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 SLKQ9H2G2 1235 aaPredicted RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 ELP3Q9H9T3 547 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 NSFL1CQ9UNZ2 370 aaKnown RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 ATP6V0A2Q9Y487 856 aa6.92□□□□□ -1.3
SSX1-201ENST00000376919 LRRFIP2Q9Y608 721 aaKnown RBP6.92□□□□□ -1.3
SSX1-201ENST00000376919 PPIP5K2O43314 1243 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 UFL1O94874 794 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 RLBP1P12271 317 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 LMNB1P20700 586 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 EIF4A3P38919 411 aaKnown RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 CASP7P55210 303 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 RRP1P56182 461 aaKnown RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 OS9Q13438 667 aaPredicted RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 GRM2Q14416 872 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 MVPQ14764 893 aaKnown RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 OLFM4Q6UX06 510 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 LDHAL6AQ6ZMR3 332 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 CERS3Q8IU89 383 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 NIM1KQ8IY84 436 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 ZNF280CQ8ND82 737 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 ZNF526Q8TF50 670 aaPredicted RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 JDP2Q8WYK2 163 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 TMEM74Q96NL1 305 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 EYA3Q99504 573 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 USP44Q9H0E7 712 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 ZNF277Q9NRM2 450 aaPredicted RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 GINM1Q9NU53 330 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 PPP4R2Q9NY27 417 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 DDX19BQ9UMR2 479 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 R3HCC1Q9Y3T6 440 aaKnown RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 MRVI1Q9Y6F6 885 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 SBF1O95248 1867 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 RTL9Q8NET4 1388 aa6.91□□□□□ -1.3
SSX1-201ENST00000376919 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
SSX1-201ENST00000376919 COL4A1P02462 1669 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 SRGAP3O43295 1099 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 CDC45O75419 566 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 POLR3DP05423 398 aaPredicted RBP6.9□□□□□ -1.3
SSX1-201ENST00000376919 CENPBP07199 599 aaPredicted RBP6.9□□□□□ -1.3
SSX1-201ENST00000376919 GBP2P32456 591 aaPredicted RBP6.9□□□□□ -1.3
SSX1-201ENST00000376919 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
SSX1-201ENST00000376919 FOXO4P98177 505 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 LAPTM4AQ15012 233 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
SSX1-201ENST00000376919 CCDC85BQ15834 202 aaPredicted RBP6.9□□□□□ -1.3
SSX1-201ENST00000376919 SP8Q8IXZ3 490 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 EAF1Q96JC9 268 aaPredicted RBP6.9□□□□□ -1.3
SSX1-201ENST00000376919 HSH2DQ96JZ2 352 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 ANKRD2Q9GZV1 360 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 SIL1Q9H173 461 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 TMEM63CQ9P1W3 806 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 PRKAG3Q9UGI9 489 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 DNMT3LQ9UJW3 386 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 GGA1Q9UJY5 639 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 DYRK1BQ9Y463 629 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 UTYO14607 1347 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 XDHP47989 1333 aa6.9□□□□□ -1.3
SSX1-201ENST00000376919 MYH13Q9UKX3 1938 aa6.89□□□□□ -1.31
SSX1-201ENST00000376919 MINDY4BA8MYZ0 360 aa6.89□□□□□ -1.31
SSX1-201ENST00000376919 NFKBIEO00221 500 aa6.89□□□□□ -1.31
SSX1-201ENST00000376919 CSF1RP07333 972 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms