RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 SCP2P22307 547 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 CYLC1P35663 651 aaPredicted RBP24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 NNTQ13423 1086 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 CCDC57Q2TAC2 916 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 SPATS2Q86XZ4 545 aaKnown RBP24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 NHEJ1Q9H9Q4 299 aaPredicted RBP24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 MCM8Q9UJA3 840 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 LRP6O75581 1613 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 MYH6P13533 1939 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 CHD4Q14839 1912 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 AKAP11Q9UKA4 1901 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 CHUKO15111 745 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 KRT14P02533 472 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 TDO2P48775 406 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 GUCY1A3Q02108 690 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 RNF187Q5TA31 235 aaPredicted RBP24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 PURBQ96QR8 312 aaKnown RBP24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 AGPAT5Q9NUQ2 364 aa24.6■■□□□ 1.53
SYNDIG1-201ENST00000376862 KIF1AQ12756 1690 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 LGALS16A8MUM7 142 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 LSP1P33241 339 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 RDXP35241 583 aaKnown RBP24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 ZNF174Q15697 407 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 RRP12Q5JTH9 1297 aaKnown RBP24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 SPATA4Q8NEY3 305 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 ATRNO75882 1429 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 NID2Q14112 1375 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 A6NNZ2 444 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 C21orf2O43822 256 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 PRCPP42785 496 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 APBA1Q02410 837 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 MEA1Q16626 185 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 TUBB8Q3ZCM7 444 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 ZNF507Q8TCN5 953 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 ZNF473Q8WTR7 871 aaKnown RBP24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 NUP133Q8WUM0 1156 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 ZBTB3Q9H5J0 574 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 KLC4Q9NSK0 619 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 EHD2Q9NZN4 543 aa24.59■■□□□ 1.53
SYNDIG1-201ENST00000376862 NEDD9Q14511 834 aa24.58■■□□□ 1.53
SYNDIG1-201ENST00000376862 ZNF658Q5TYW1 1059 aaPredicted RBP24.58■■□□□ 1.53
SYNDIG1-201ENST00000376862 EMBQ6PCB8 327 aa24.58■■□□□ 1.53
SYNDIG1-201ENST00000376862 FNBP4Q8N3X1 1017 aaPredicted RBP24.58■■□□□ 1.53
SYNDIG1-201ENST00000376862 FERMT2Q96AC1 680 aa24.58■■□□□ 1.53
SYNDIG1-201ENST00000376862 EPN3Q9H201 632 aa24.58■■□□□ 1.53
SYNDIG1-201ENST00000376862 ABCC12Q96J65 1359 aa24.58■■□□□ 1.52
SYNDIG1-201ENST00000376862 MICALCLQ6ZW33 695 aa24.58■■□□□ 1.52
SYNDIG1-201ENST00000376862 EPB41L4AQ9HCS5 686 aaPredicted RBP24.58■■□□□ 1.52
SYNDIG1-201ENST00000376862 A0A1W2PQC6 194 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 ZC3H6P61129 1189 aaKnown RBP24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 SF3B2Q13435 895 aaKnown RBP24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 HAUS3Q68CZ6 603 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 PDXDC2PQ6P474 469 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 VCPKMTQ9H867 229 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 RGPD5Q99666 1765 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 IPO7O95373 1038 aaKnown RBP24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 ELF1P32519 619 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 ATP2B2Q01814 1243 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 WTAPQ15007 396 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 PREPLQ4J6C6 727 aaPredicted RBP24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 KDM7AQ6ZMT4 941 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 RAPGEF4Q8WZA2 1011 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 RUBCNQ92622 972 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 CAVIN3Q969G5 261 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 PSMB7Q99436 277 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 STIM2Q9P246 746 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 LRWD1Q9UFC0 647 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 CAPN6Q9Y6Q1 641 aa24.57■■□□□ 1.52
SYNDIG1-201ENST00000376862 GTPBP6O43824 516 aaPredicted RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 IBSPP21815 317 aaPredicted RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 KLK7P49862 253 aa24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 ACTN3Q08043 901 aaPredicted RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 TCIRG1Q13488 830 aa24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 YTHDF3Q7Z739 585 aaKnown RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 STRBPQ96SI9 672 aaKnown RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 PAGR1Q9BTK6 254 aa24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 H7C1D1 291 aa24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 SEC24CP53992 1094 aa24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 PMS1P54277 932 aaKnown RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 KIF5AQ12840 1032 aa24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 ZNF572Q7Z3I7 529 aaPredicted RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 ZNF622Q969S3 477 aaKnown RBP eCLIP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 TACO1Q9BSH4 297 aaKnown RBP24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 CENPHQ9H3R5 247 aa24.56■■□□□ 1.52
SYNDIG1-201ENST00000376862 PDS5AQ29RF7 1337 aaKnown RBP24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 hCG_1642624A0A1W2PR95 340 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 PRDM1O75626 825 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 PDE6AP16499 860 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 CXCR5P32302 372 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 HDLBPQ00341 1268 aaKnown RBP24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 UBE3CQ15386 1083 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 CCDC40Q4G0X9 1142 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 NUP188Q5SRE5 1749 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 NFRKBQ6P4R8 1299 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 CCDC13Q8IYE1 715 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 DDX17Q92841 729 aaKnown RBP24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 MYH10P35580 1976 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 RPN1P04843 607 aaKnown RBP24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 SMTNP53814 917 aa24.55■■□□□ 1.52
SYNDIG1-201ENST00000376862 PTGISQ16647 500 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms