RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 BICDL1Q6ZP65 573 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 ELOA2Q8IYF1 753 aaPredicted RBP17.73■□□□□ 0.43
SSH3-203ENST00000376757 ANKRD13CQ8N6S4 541 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 HDAC7Q8WUI4 952 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 HNRNPLLQ8WVV9 542 aaKnown RBP17.73■□□□□ 0.43
SSH3-203ENST00000376757 KLRK1P26718 216 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 KCNQ4P56696 695 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 ATP2C1P98194 919 aaPredicted RBP17.73■□□□□ 0.43
SSH3-203ENST00000376757 FERMT2Q96AC1 680 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 LIMA1Q9UHB6 759 aaKnown RBP17.73■□□□□ 0.43
SSH3-203ENST00000376757 LMTK3Q96Q04 1460 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 GGCXP38435 758 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 WHAMMP3Q1A5X7 153 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 BRINP3Q76B58 766 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
SSH3-203ENST00000376757 IGHMBP2P38935 993 aaKnown RBP17.72■□□□□ 0.43
SSH3-203ENST00000376757 JAKMIP2Q96AA8 810 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 UIMC1Q96RL1 719 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 RWDD2AQ9UIY3 292 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 SAR1BQ9Y6B6 198 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 CHD4Q14839 1912 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 PRPF3O43395 683 aaKnown RBP17.72■□□□□ 0.43
SSH3-203ENST00000376757 SYF2O95926 243 aaKnown RBP17.72■□□□□ 0.43
SSH3-203ENST00000376757 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 OR8K1Q8NGG5 319 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 CTCFLQ8NI51 663 aaPredicted RBP17.72■□□□□ 0.43
SSH3-203ENST00000376757 LRRC15Q8TF66 581 aa17.72■□□□□ 0.43
SSH3-203ENST00000376757 TMTC3Q6ZXV5 915 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 ZNF384Q8TF68 577 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 CARD10Q9BWT7 1032 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 GNAT2P19087 354 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 TSR1Q2NL82 804 aaKnown RBP17.71■□□□□ 0.43
SSH3-203ENST00000376757 CCDC178Q5BJE1 867 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 TYW1BQ6NUM6 668 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 MB21D1Q8N884 522 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 TNFRSF25Q93038 417 aa17.71■□□□□ 0.43
SSH3-203ENST00000376757 RRP36Q96EU6 259 aaKnown RBP17.71■□□□□ 0.43
SSH3-203ENST00000376757 POTEB2H3BUK9 544 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 GTPBP6O43824 516 aaPredicted RBP17.7■□□□□ 0.42
SSH3-203ENST00000376757 IDEP14735 1019 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 INF2Q27J81 1249 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 ZNF658Q5TYW1 1059 aaPredicted RBP17.7■□□□□ 0.42
SSH3-203ENST00000376757 C3orf67Q6ZVT6 689 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
SSH3-203ENST00000376757 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 FAM170AA1A519 330 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 GOLGA8HP0CJ92 632 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 CTR9Q6PD62 1173 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 TRAPPC11Q7Z392 1133 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 GOLGA6L1Q8N7Z2 621 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 BTG4Q9NY30 223 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 EIF3CLB5ME19 914 aaKnown RBP17.7■□□□□ 0.42
SSH3-203ENST00000376757 SCG2P13521 617 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 USP14P54578 494 aa17.7■□□□□ 0.42
SSH3-203ENST00000376757 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
SSH3-203ENST00000376757 PNPLA7Q6ZV29 1317 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 TSPY2A6NKD2 308 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 FCER1AP12319 257 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 FAM71BQ8TC56 605 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 CCDC51Q96ER9 411 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 RIOK1Q9BRS2 568 aaKnown RBP17.69■□□□□ 0.42
SSH3-203ENST00000376757 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 MYH10P35580 1976 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 AFAP1L1Q8TED9 768 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 SMARCC1Q92922 1105 aaPredicted RBP17.69■□□□□ 0.42
SSH3-203ENST00000376757 LRWD1Q9UFC0 647 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 HPCAL4Q9UM19 191 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 TNS2Q63HR2 1409 aa17.69■□□□□ 0.42
SSH3-203ENST00000376757 CSGALNACT2Q8N6G5 542 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 FAM207AQ9NSI2 230 aaPredicted RBP17.68■□□□□ 0.42
SSH3-203ENST00000376757 PSD3Q9NYI0 1048 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 COL5A2P05997 1499 aaPredicted RBP17.68■□□□□ 0.42
SSH3-203ENST00000376757 ADAMTSL3P82987 1691 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 LRP6O75581 1613 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 ITIH6Q6UXX5 1313 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 NCK2O43639 380 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 TBC1D8BQ0IIM8 1120 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 STIM1Q13586 685 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
SSH3-203ENST00000376757 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 PACS2Q86VP3 889 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 COG1Q8WTW3 980 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 DYNLL2Q96FJ2 89 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 CRACR2AQ9BSW2 395 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 NHEJ1Q9H9Q4 299 aaPredicted RBP17.68■□□□□ 0.42
SSH3-203ENST00000376757 MYH13Q9UKX3 1938 aa17.68■□□□□ 0.42
SSH3-203ENST00000376757 RNASE9P60153 205 aaKnown RBP17.67■□□□□ 0.42
SSH3-203ENST00000376757 HEATR3Q7Z4Q2 680 aa17.67■□□□□ 0.42
SSH3-203ENST00000376757 TUBGCP2Q9BSJ2 902 aa17.67■□□□□ 0.42
SSH3-203ENST00000376757 SELENOOQ9BVL4 669 aa17.67■□□□□ 0.42
SSH3-203ENST00000376757 MAGEC2Q9UBF1 373 aaPredicted RBP17.67■□□□□ 0.42
SSH3-203ENST00000376757 LRRC10BA6NIK2 292 aa17.67■□□□□ 0.42
SSH3-203ENST00000376757 UBA7P41226 1012 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms