RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PARP14Q460N5 1801 aa17.54■□□□□ 0.4
HDAC6-204ENST00000376643 M0R2C6 588 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 PGK2P07205 417 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 AAMPQ13685 434 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.53■□□□□ 0.4
HDAC6-204ENST00000376643 FAM160B2Q86V87 743 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 STK11IPQ8N1F8 1099 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 DEFB123Q8N688 67 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 NEDD1Q8NHV4 660 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 PI4K2BQ8TCG2 481 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 CHURC1Q8WUH1 139 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 CEP95Q96GE4 821 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 PHF24Q9UPV7 400 aa17.53■□□□□ 0.4
HDAC6-204ENST00000376643 PPARAQ07869 468 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 FAM47AQ5JRC9 791 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 ZMYM1Q5SVZ6 1142 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 PRAMEF19Q5SWL8 479 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 NUP133Q8WUM0 1156 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 KIFC2Q96AC6 838 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 TSEN34Q9BSV6 310 aaKnown RBP17.52■□□□□ 0.4
HDAC6-204ENST00000376643 SPC25Q9HBM1 224 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 SLC38A10Q9HBR0 1119 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 FAM184BQ9ULE4 1060 aa17.52■□□□□ 0.4
HDAC6-204ENST00000376643 PRDM1O75626 825 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 BMP3P12645 472 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 ADCYAP1R1P41586 468 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 STAT2P52630 851 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 ANO1Q5XXA6 986 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 SLFN13Q68D06 897 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 MAMDC4Q6UXC1 1216 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 CPXCR1Q8N123 301 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 ANKRD35Q8N283 1001 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 NUP88Q99567 741 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-204ENST00000376643 PRDM5Q9NQX1 630 aaPredicted RBP17.51■□□□□ 0.39
HDAC6-204ENST00000376643 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
HDAC6-204ENST00000376643 TACC3Q9Y6A5 838 aa17.51■□□□□ 0.39
HDAC6-204ENST00000376643 MOXD2PA6NHM9 499 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 TSPY2A6NKD2 308 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 SLC1A4P43007 532 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 RRP1P56182 461 aaKnown RBP17.5■□□□□ 0.39
HDAC6-204ENST00000376643 TFAP4Q01664 338 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-204ENST00000376643 TKFCQ3LXA3 575 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 TRIM60Q495X7 471 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 FAM109BQ6ICB4 259 aaPredicted RBP17.5■□□□□ 0.39
HDAC6-204ENST00000376643 GMCL1Q96IK5 515 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 STXBP5LQ9Y2K9 1186 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
HDAC6-204ENST00000376643 COL11A1P12107 1806 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-204ENST00000376643 DNAJC25-GNG10A0A024R161 153 aa17.49■□□□□ 0.39
HDAC6-204ENST00000376643 PLA2G6O60733 806 aa17.49■□□□□ 0.39
HDAC6-204ENST00000376643 ZNF865P0CJ78 1059 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-204ENST00000376643 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
HDAC6-204ENST00000376643 SLC17A8Q8NDX2 589 aa17.49■□□□□ 0.39
HDAC6-204ENST00000376643 ABHD16BQ9H3Z7 469 aa17.49■□□□□ 0.39
HDAC6-204ENST00000376643 ACAD9Q9H845 621 aa17.49■□□□□ 0.39
HDAC6-204ENST00000376643 MROH7Q68CQ1 1323 aa17.48■□□□□ 0.39
HDAC6-204ENST00000376643 DUSP11O75319 330 aaKnown RBP17.48■□□□□ 0.39
HDAC6-204ENST00000376643 SLC4A3P48751 1232 aa17.48■□□□□ 0.39
HDAC6-204ENST00000376643 PCSK9Q8NBP7 692 aaKnown RBP17.48■□□□□ 0.39
HDAC6-204ENST00000376643 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
HDAC6-204ENST00000376643 RAVER2Q9HCJ3 691 aaKnown RBP17.48■□□□□ 0.39
HDAC6-204ENST00000376643 HELLSQ9NRZ9 838 aa17.48■□□□□ 0.39
HDAC6-204ENST00000376643 ZHX1Q9UKY1 873 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-204ENST00000376643 SZT2Q5T011 3432 aa17.48■□□□□ 0.39
HDAC6-204ENST00000376643 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 PGK1P00558 417 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 CLTBP09497 229 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 HDAC1Q13547 482 aaPredicted RBP17.47■□□□□ 0.39
HDAC6-204ENST00000376643 ANKRD45Q5TZF3 282 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 FERMT2Q96AC1 680 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 GLT1D1Q96MS3 346 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 TOX2Q96NM4 488 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 STARD7Q9NQZ5 370 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 PDLIM7Q9NR12 457 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 PNMA2Q9UL42 364 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 STX8Q9UNK0 236 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 ZNFX1Q9P2E3 1918 aaKnown RBP17.47■□□□□ 0.39
HDAC6-204ENST00000376643 MYH4Q9Y623 1939 aa17.47■□□□□ 0.39
HDAC6-204ENST00000376643 LAMA3Q16787 3333 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 PLXNA1Q9UIW2 1896 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 A0A1W2PQ45 241 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-204ENST00000376643 A0A1W2PQY0 241 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 ASB14A6NK59 587 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 DCDC2CA8MYV0 355 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 ADAMTS4O75173 837 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 PCP11498 1178 aaKnown RBP17.46■□□□□ 0.39
HDAC6-204ENST00000376643 CST5P28325 142 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-204ENST00000376643 NT5C2P49902 561 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 TLE2Q04725 743 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 ACVR2BQ13705 512 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 ZNF697Q5TEC3 545 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 SEC62Q99442 399 aaKnown RBP17.46■□□□□ 0.39
HDAC6-204ENST00000376643 MTMR10Q9NXD2 777 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-204ENST00000376643 ANAPC4Q9UJX5 808 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 RIPK3Q9Y572 518 aa17.46■□□□□ 0.39
HDAC6-204ENST00000376643 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
HDAC6-204ENST00000376643 ACLYP53396 1101 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms