RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 SNX29Q8TEQ0 813 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 TTC14Q96N46 770 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 NAT10Q9H0A0 1025 aaKnown RBP15.34■□□□□ 0.05
DDR1-225ENST00000376568 VEGFAP15692 232 aaPredicted RBP15.34■□□□□ 0.05
DDR1-225ENST00000376568 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
DDR1-225ENST00000376568 QRICH1Q2TAL8 776 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 ZSCAN23Q3MJ62 389 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 KRI1Q8N9T8 703 aaKnown RBP15.34■□□□□ 0.05
DDR1-225ENST00000376568 RPAP3Q9H6T3 665 aaPredicted RBP15.34■□□□□ 0.05
DDR1-225ENST00000376568 CSPG5O95196 566 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 TPM2P07951 284 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 CCDC183Q5T5S1 534 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 SNRNP48Q6IEG0 339 aaKnown RBP15.34■□□□□ 0.05
DDR1-225ENST00000376568 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 NEDD1Q8NHV4 660 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 FAM151AQ8WW52 585 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 LRWD1Q9UFC0 647 aa15.34■□□□□ 0.05
DDR1-225ENST00000376568 CALCRLQ16602 461 aa15.33■□□□□ 0.05
DDR1-225ENST00000376568 FAM47CQ5HY64 1035 aa15.33■□□□□ 0.05
DDR1-225ENST00000376568 SYCP3Q8IZU3 236 aa15.33■□□□□ 0.05
DDR1-225ENST00000376568 SMARCE1Q969G3 411 aa15.33■□□□□ 0.05
DDR1-225ENST00000376568 TRPM3Q9HCF6 1732 aaPredicted RBP15.33■□□□□ 0.04
DDR1-225ENST00000376568 NOP56O00567 594 aaKnown RBP15.33■□□□□ 0.04
DDR1-225ENST00000376568 LIFRP42702 1097 aa15.33■□□□□ 0.04
DDR1-225ENST00000376568 GLG1Q92896 1179 aa15.33■□□□□ 0.04
DDR1-225ENST00000376568 GRPEL1Q9HAV7 217 aa15.33■□□□□ 0.04
DDR1-225ENST00000376568 MAGEC2Q9UBF1 373 aaPredicted RBP15.33■□□□□ 0.04
DDR1-225ENST00000376568 ANO6Q4KMQ2 910 aa15.33■□□□□ 0.04
DDR1-225ENST00000376568 DGKHQ86XP1 1220 aa15.33■□□□□ 0.04
DDR1-225ENST00000376568 ZDHHC15Q96MV8 337 aa15.33■□□□□ 0.04
DDR1-225ENST00000376568 LLPHQ9BRT6 129 aaKnown RBP15.33■□□□□ 0.04
DDR1-225ENST00000376568 EHMT1Q9H9B1 1298 aa15.33■□□□□ 0.04
DDR1-225ENST00000376568 NR1I2O75469 434 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
DDR1-225ENST00000376568 RILPL1Q5EBL4 403 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 ZNF384Q8TF68 577 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 GCOM1H8Y6P7 765 aaPredicted RBP15.32■□□□□ 0.04
DDR1-225ENST00000376568 POLR2MP0CAP2 368 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 IFNAR1P17181 557 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 PPP4R3BQ5MIZ7 849 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 ZNF830Q96NB3 372 aaPredicted RBP15.32■□□□□ 0.04
DDR1-225ENST00000376568 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 SEPT11Q9NVA2 429 aaKnown RBP15.32■□□□□ 0.04
DDR1-225ENST00000376568 ZHX1Q9UKY1 873 aaPredicted RBP15.32■□□□□ 0.04
DDR1-225ENST00000376568 TMTC3Q6ZXV5 915 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 BICD1Q96G01 975 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 AGBL1Q96MI9 1066 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 SUGCTQ9HAC7 445 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 FAM198AQ9UFP1 575 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 KCNH3Q9ULD8 1083 aa15.32■□□□□ 0.04
DDR1-225ENST00000376568 NEMFO60524 1076 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 POTEIP0CG38 1075 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 POTEJP0CG39 1038 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 EXOSC10Q01780 885 aaKnown RBP15.31■□□□□ 0.04
DDR1-225ENST00000376568 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
DDR1-225ENST00000376568 NELFCDQ8IXH7 590 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 PP2D1A8MPX8 630 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 RHBDL3P58872 404 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 STIM1Q13586 685 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
DDR1-225ENST00000376568 LUZP1Q86V48 1076 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
DDR1-225ENST00000376568 RDH13Q8NBN7 331 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 TTC16Q8NEE8 873 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 LMO7Q8WWI1 1683 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 DDAH1O94760 285 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 MARK3P27448 753 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 BRAPQ7Z569 592 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 APOBEC3FQ8IUX4 373 aaKnown RBP15.31■□□□□ 0.04
DDR1-225ENST00000376568 CLMNQ96JQ2 1002 aa15.31■□□□□ 0.04
DDR1-225ENST00000376568 ZNF512BQ96KM6 892 aaPredicted RBP15.31■□□□□ 0.04
DDR1-225ENST00000376568 PLA2G4DQ86XP0 818 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 ATG4CQ96DT6 458 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 ABCC6O95255 1503 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 GAS7O60861 476 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 FMNL1O95466 1100 aaPredicted RBP15.3■□□□□ 0.04
DDR1-225ENST00000376568 KCTD2Q14681 263 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 EPSTI1Q96J88 318 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 PCDHA7Q9UN72 937 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 KIF23Q02241 960 aaPredicted RBP15.3■□□□□ 0.04
DDR1-225ENST00000376568 ALX1Q15699 326 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 MKRN1Q9UHC7 482 aaKnown RBP15.3■□□□□ 0.04
DDR1-225ENST00000376568 SERTAD1Q9UHV2 236 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 PCDHA12Q9UN75 941 aa15.3■□□□□ 0.04
DDR1-225ENST00000376568 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 KIF28PB7ZC32 967 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 RGL2O15211 777 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 TBCAO75347 108 aaKnown RBP15.29■□□□□ 0.04
DDR1-225ENST00000376568 YBX3P16989 372 aaKnown RBP eCLIP15.29■□□□□ 0.044e-7■□□□□ 9.7
DDR1-225ENST00000376568 USP8P40818 1118 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 PNOCQ13519 176 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 WWC2Q6AWC2 1192 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 AOPEPQ8N6M6 819 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 TMEM63CQ9P1W3 806 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 ASPRV1Q53RT3 343 aa15.29■□□□□ 0.04
DDR1-225ENST00000376568 SMYD4Q8IYR2 804 aaPredicted RBP15.29■□□□□ 0.04
DDR1-225ENST00000376568 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms