RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ZMYND12Q9H0C1 365 aa20.25■□□□□ 0.83
CTTN-203ENST00000376561 BMP15O95972 392 aa20.24■□□□□ 0.83
CTTN-203ENST00000376561 SYKP43405 635 aa20.24■□□□□ 0.83
CTTN-203ENST00000376561 PRELPP51888 382 aa20.24■□□□□ 0.83
CTTN-203ENST00000376561 JAG1P78504 1218 aa20.24■□□□□ 0.83
CTTN-203ENST00000376561 RRP1BQ14684 758 aaKnown RBP20.24■□□□□ 0.83
CTTN-203ENST00000376561 CCDC96Q2M329 555 aa20.24■□□□□ 0.83
CTTN-203ENST00000376561 GH2P01242 217 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 RPS12P25398 132 aaKnown RBP20.23■□□□□ 0.83
CTTN-203ENST00000376561 MMP14P50281 582 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 GRIN1Q05586 938 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 UVSSAQ2YD98 709 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 RASGRP4Q8TDF6 673 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 PCDHA6Q9UN73 950 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 PCDHA8Q9Y5H6 950 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 hCG_1984214I3L0E3 225 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 ZNF280AP59817 542 aaPredicted RBP20.23■□□□□ 0.83
CTTN-203ENST00000376561 CCDC173Q0VFZ6 552 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 ZNF174Q15697 407 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 TTBK2Q6IQ55 1244 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 KCTD1Q719H9 257 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 ZNF713Q8N859 430 aaPredicted RBP20.23■□□□□ 0.83
CTTN-203ENST00000376561 ZNF579Q8NAF0 562 aaKnown RBP20.23■□□□□ 0.83
CTTN-203ENST00000376561 TMEM39BQ9GZU3 492 aa20.23■□□□□ 0.83
CTTN-203ENST00000376561 FZD9O00144 591 aa20.22■□□□□ 0.83
CTTN-203ENST00000376561 ADGRF4Q8IZF3 695 aa20.22■□□□□ 0.83
CTTN-203ENST00000376561 JMJD4Q9H9V9 463 aa20.22■□□□□ 0.83
CTTN-203ENST00000376561 SPECC1Q5M775 1068 aa20.22■□□□□ 0.83
CTTN-203ENST00000376561 DCAF4Q8WV16 495 aa20.22■□□□□ 0.83
CTTN-203ENST00000376561 TIGD1Q96MW7 591 aa20.22■□□□□ 0.83
CTTN-203ENST00000376561 CCDC194A0A1B0GVG4 234 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 SMCO2A6NFE2 343 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 GNA11P29992 359 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 SLC1A4P43007 532 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 ANO6Q4KMQ2 910 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 SLFN13Q68D06 897 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 CDAN1Q8IWY9 1227 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 PPP1R9BQ96SB3 815 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 C6orf50Q9HD87 102 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 KCNH3Q9ULD8 1083 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 RAD21O60216 631 aa20.21■□□□□ 0.83
CTTN-203ENST00000376561 PNMA6FA0A0J9YX94 578 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 ESYT2A0FGR8 921 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 TBC1D12O60347 775 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 EGFRP00533 1210 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 SLC16A2P36021 539 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 ATP2C1P98194 919 aaPredicted RBP20.2■□□□□ 0.82
CTTN-203ENST00000376561 PTGDRQ13258 359 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 GMCL1P1Q8NEA9 526 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 FAM200AQ8TCP9 573 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 PGAP2Q9UHJ9 254 aa20.2■□□□□ 0.82
CTTN-203ENST00000376561 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.19■□□□□ 0.82
CTTN-203ENST00000376561 F5H6K3 240 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 GMPSP49915 693 aaPredicted RBP20.19■□□□□ 0.82
CTTN-203ENST00000376561 KLRC3Q07444 240 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 DPF2Q92785 391 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 ERCC4Q92889 916 aaPredicted RBP20.19■□□□□ 0.82
CTTN-203ENST00000376561 FERMT2Q96AC1 680 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 CSRNP2Q9H175 543 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 MCM7P33993 719 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 COA7Q96BR5 231 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 SPON1Q9HCB6 807 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 KIAA1468Q9P260 1216 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 GJA3Q9Y6H8 435 aa20.19■□□□□ 0.82
CTTN-203ENST00000376561 USP17L10C9JJH3 530 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 TNNI2P48788 182 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 MICALL2Q8IY33 904 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 STX1AQ16623 288 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 MIGA2Q7L4E1 593 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 PDLIM2Q96JY6 352 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 DNAJC25Q9H1X3 360 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 SYNPO2Q9UMS6 1093 aa20.18■□□□□ 0.82
CTTN-203ENST00000376561 A0A1W2PRG0 241 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 ZBTB5O15062 677 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 PPP1R11O60927 126 aaPredicted RBP20.17■□□□□ 0.82
CTTN-203ENST00000376561 NDUFB10O96000 172 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 INF2Q27J81 1249 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 KRT25Q7Z3Z0 450 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 GMCL1Q96IK5 515 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 CNOT7Q9UIV1 285 aaKnown RBP20.17■□□□□ 0.82
CTTN-203ENST00000376561 UTRNP46939 3433 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 CAVIN2O95810 425 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 RASA3Q14644 834 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 LONRF3Q496Y0 759 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 ZBTB21Q9ULJ3 1066 aa20.17■□□□□ 0.82
CTTN-203ENST00000376561 ZNF165P49910 485 aa20.16■□□□□ 0.82
CTTN-203ENST00000376561 MAP3K10Q02779 954 aa20.16■□□□□ 0.82
CTTN-203ENST00000376561 PPP1R18Q6NYC8 613 aa20.16■□□□□ 0.82
CTTN-203ENST00000376561 KRBA2Q6ZNG9 492 aa20.16■□□□□ 0.82
CTTN-203ENST00000376561 USP49Q70CQ1 688 aa20.16■□□□□ 0.82
CTTN-203ENST00000376561 SAMD7Q7Z3H4 446 aa20.16■□□□□ 0.82
CTTN-203ENST00000376561 REXO1Q8N1G1 1221 aaKnown RBP20.16■□□□□ 0.82
CTTN-203ENST00000376561 CBX8Q9HC52 389 aa20.16■□□□□ 0.82
CTTN-203ENST00000376561 SCAF8Q9UPN6 1271 aaKnown RBP20.16■□□□□ 0.82
CTTN-203ENST00000376561 ZNF541Q9H0D2 1346 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 TNFAIP1Q13829 316 aa20.15■□□□□ 0.82
CTTN-203ENST00000376561 NONOQ15233 471 aaKnown RBP eCLIP20.15■□□□□ 0.823e-6■■■■■ 28.6
CTTN-203ENST00000376561 C4orf32Q8N8J7 132 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms