RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 KCNA6P17658 529 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 CYP4A11Q02928 519 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 CCDC38Q502W7 563 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 HS1BP3Q53T59 392 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 JADE1Q6IE81 842 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 NIM1KQ8IY84 436 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 FIS1Q9Y3D6 152 aa15.08■□□□□ 0
COL4A1-201ENST00000375820 TUBBP07437 444 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 POTEDQ86YR6 584 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 PPP1R16BQ96T49 567 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 BCS1LQ9Y276 419 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 SAR1BQ9Y6B6 198 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 PPM1KQ8N3J5 372 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 CCDC87Q9NVE4 849 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 ARHGAP6O43182 974 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 BEGAINQ9BUH8 593 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 PLCB4Q15147 1175 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 MFSD14BQ5SR56 506 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 KIAA0825Q8IV33 1275 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 ORAI2Q96SN7 254 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 MRPL46Q9H2W6 279 aaKnown RBP15.07■□□□□ 0
COL4A1-201ENST00000375820 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 STAT1P42224 750 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 PARP10Q53GL7 1025 aa15.07■□□□□ 0
COL4A1-201ENST00000375820 BCAMP50895 628 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 POLA2Q14181 598 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 OTUD6AQ7L8S5 288 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 ARHGAP24Q8N264 748 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 ZNF654Q8IZM8 581 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 SPDL1Q96EA4 605 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 RIPOR2Q9Y4F9 1068 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 THAP12O43422 761 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 PDZD8Q8NEN9 1154 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 HDAC11Q96DB2 347 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 PSTPIP2Q9H939 334 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 APBA3O96018 575 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 TROVE2P10155 538 aaKnown RBP eCLIP15.06■□□□□ 0
COL4A1-201ENST00000375820 KCTD16Q68DU8 428 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 TPX2Q9ULW0 747 aaKnown RBP15.06■□□□□ 0
COL4A1-201ENST00000375820 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
COL4A1-201ENST00000375820 MAST3O60307 1309 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 POC1B-GALNT4F8VUJ3 575 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 P4HA1P13674 534 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 PTH1RQ03431 593 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 SLC52A2Q9HAB3 445 aa15.06■□□□□ 0
COL4A1-201ENST00000375820 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ 0
COL4A1-201ENST00000375820 TCIRG1Q13488 830 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 MYLK4Q86YV6 388 aaPredicted RBP15.05■□□□□ 0
COL4A1-201ENST00000375820 SPICE1Q8N0Z3 855 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 CXorf38Q8TB03 319 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 RAB17Q9H0T7 212 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 IMPACTQ9P2X3 320 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 CD2APQ9Y5K6 639 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 USH1CQ9Y6N9 552 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 ESYT2A0FGR8 921 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 LRRIQ4A6NIV6 560 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 TMOD1P28289 359 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 SNX1Q13596 522 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 MTMR3Q13615 1198 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 DISC1Q9NRI5 854 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 RTEL1Q9NZ71 1219 aa15.05■□□□□ 0
COL4A1-201ENST00000375820 SERPINB6P35237 376 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 MYOCDQ8IZQ8 938 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.05■□□□□ -0
COL4A1-201ENST00000375820 SBNO1A3KN83 1393 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 PIK3CAP42336 1068 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 PGBD1Q96JS3 809 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 SPATA17Q96L03 361 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 TMEM63CQ9P1W3 806 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 DDX25Q9UHL0 483 aaKnown RBP15.05■□□□□ -0
COL4A1-201ENST00000375820 RNF40O75150 1001 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 ECE1P42892 770 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 FAM71BQ8TC56 605 aa15.05■□□□□ -0
COL4A1-201ENST00000375820 TRIM56Q9BRZ2 755 aaKnown RBP15.05■□□□□ -0
COL4A1-201ENST00000375820 SPECC1L-ADORA2AF8WAN1 911 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 ZMYND10O75800 440 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 PDE6CP51160 858 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 GCKRQ14397 625 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 MICAL1Q8TDZ2 1067 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 KIF9Q9HAQ2 790 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 ADD1P35611 737 aaKnown RBP15.04■□□□□ -0
COL4A1-201ENST00000375820 ZSCAN10Q96SZ4 725 aaPredicted RBP15.04■□□□□ -0
COL4A1-201ENST00000375820 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
COL4A1-201ENST00000375820 IBTKQ9P2D0 1353 aaPredicted RBP15.04■□□□□ -0
COL4A1-201ENST00000375820 ENC1O14682 589 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 MYRIPQ8NFW9 859 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 GBP5Q96PP8 586 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 LMBRD1Q9NUN5 540 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 TNNC2P02585 160 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 RCN2Q14257 317 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
COL4A1-201ENST00000375820 GJA10Q969M2 543 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 FAM193BQ96PV7 902 aaPredicted RBP15.04■□□□□ -0
COL4A1-201ENST00000375820 PCDHA12Q9UN75 941 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 A0A087WWV3 80 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 A0A0D9SFI3 127 aa15.04■□□□□ -0
COL4A1-201ENST00000375820 MMEL1Q495T6 779 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms