RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 GREB1LQ9C091 1923 aaPredicted RBP23.6■■□□□ 1.37
C6orf48-205ENST00000375640 BRCA2P51587 3418 aa23.6■■□□□ 1.37
C6orf48-205ENST00000375640 TMEM232C9JQI7 657 aa23.59■■□□□ 1.37
C6orf48-205ENST00000375640 FARP2O94887 1054 aaPredicted RBP23.59■■□□□ 1.37
C6orf48-205ENST00000375640 IGHA2P01877 340 aa23.59■■□□□ 1.37
C6orf48-205ENST00000375640 TOP1P11387 765 aaKnown RBP23.59■■□□□ 1.37
C6orf48-205ENST00000375640 CHMLP26374 656 aa23.59■■□□□ 1.37
C6orf48-205ENST00000375640 ANKLE1Q8NAG6 615 aa23.59■■□□□ 1.37
C6orf48-205ENST00000375640 ESR2Q92731 530 aa23.59■■□□□ 1.37
C6orf48-205ENST00000375640 MMP19Q99542 508 aa23.59■■□□□ 1.37
C6orf48-205ENST00000375640 RAD50Q92878 1312 aa23.59■■□□□ 1.37
C6orf48-205ENST00000375640 RBBP6Q7Z6E9 1792 aaKnown RBP23.58■■□□□ 1.37
C6orf48-205ENST00000375640 STAT2P52630 851 aa23.58■■□□□ 1.37
C6orf48-205ENST00000375640 OAZ1P54368 228 aa23.58■■□□□ 1.37
C6orf48-205ENST00000375640 KCTD2Q14681 263 aa23.58■■□□□ 1.37
C6orf48-205ENST00000375640 IMMTQ16891 758 aaKnown RBP23.58■■□□□ 1.37
C6orf48-205ENST00000375640 DOCK3Q8IZD9 2030 aa23.57■■□□□ 1.36
C6orf48-205ENST00000375640 CCND3P30281 292 aaPredicted RBP23.57■■□□□ 1.36
C6orf48-205ENST00000375640 SNRNP48Q6IEG0 339 aaKnown RBP23.57■■□□□ 1.36
C6orf48-205ENST00000375640 CENPQQ7L2Z9 268 aaPredicted RBP23.57■■□□□ 1.36
C6orf48-205ENST00000375640 CPXCR1Q8N123 301 aa23.57■■□□□ 1.36
C6orf48-205ENST00000375640 TMEM47Q9BQJ4 181 aa23.57■■□□□ 1.36
C6orf48-205ENST00000375640 OGDHLQ9ULD0 1010 aa23.57■■□□□ 1.36
C6orf48-205ENST00000375640 ISY1Q9ULR0 285 aaKnown RBP23.57■■□□□ 1.36
C6orf48-205ENST00000375640 DIS3Q9Y2L1 958 aaKnown RBP23.57■■□□□ 1.36
C6orf48-205ENST00000375640 CYP2C19P33261 490 aa23.56■■□□□ 1.36
C6orf48-205ENST00000375640 CCDC178Q5BJE1 867 aa23.56■■□□□ 1.36
C6orf48-205ENST00000375640 DCAF4Q8WV16 495 aa23.56■■□□□ 1.36
C6orf48-205ENST00000375640 HTATIP2Q9BUP3 242 aa23.56■■□□□ 1.36
C6orf48-205ENST00000375640 IL25Q9H293 177 aa23.56■■□□□ 1.36
C6orf48-205ENST00000375640 RAVER2Q9HCJ3 691 aaKnown RBP23.56■■□□□ 1.36
C6orf48-205ENST00000375640 MYH8P13535 1937 aa23.56■■□□□ 1.36
C6orf48-205ENST00000375640 IKQ13123 557 aaPredicted RBP23.55■■□□□ 1.36
C6orf48-205ENST00000375640 LHX8Q68G74 356 aa23.55■■□□□ 1.36
C6orf48-205ENST00000375640 KCTD1Q719H9 257 aa23.55■■□□□ 1.36
C6orf48-205ENST00000375640 RIPK3Q9Y572 518 aa23.55■■□□□ 1.36
C6orf48-205ENST00000375640 RLFQ13129 1914 aa23.55■■□□□ 1.36
C6orf48-205ENST00000375640 NECAB2Q7Z6G3 386 aa23.54■■□□□ 1.36
C6orf48-205ENST00000375640 DGKHQ86XP1 1220 aa23.54■■□□□ 1.36
C6orf48-205ENST00000375640 CHST13Q8NET6 341 aa23.54■■□□□ 1.36
C6orf48-205ENST00000375640 MAML3Q96JK9 1138 aa23.54■■□□□ 1.36
C6orf48-205ENST00000375640 FBXO40Q9UH90 709 aa23.54■■□□□ 1.36
C6orf48-205ENST00000375640 NEDD4P46934 1319 aa23.54■■□□□ 1.36
C6orf48-205ENST00000375640 PLXNB2O15031 1838 aa23.54■■□□□ 1.36
C6orf48-205ENST00000375640 MSCO60682 206 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 SLC4A3P48751 1232 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 ZNF792Q3KQV3 632 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.53■■□□□ 1.36
C6orf48-205ENST00000375640 IQCA1Q86XH1 822 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 DPF3Q92784 378 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 CHMP4CQ96CF2 233 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 PAWRQ96IZ0 340 aaKnown RBP23.53■■□□□ 1.36
C6orf48-205ENST00000375640 KRT23Q9C075 422 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 MTMR7Q9Y216 660 aa23.53■■□□□ 1.36
C6orf48-205ENST00000375640 KDM4AO75164 1064 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 PGK2P07205 417 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 CCDC96Q2M329 555 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 BTNL9Q6UXG8 535 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 ANKS1AQ92625 1134 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 DDX11Q96FC9 970 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 CNNM2Q9H8M5 875 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 DDX20Q9UHI6 824 aaKnown RBP23.52■■□□□ 1.36
C6orf48-205ENST00000375640 PRR12Q9ULL5 1215 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 A0A0G2JMZ2 1700 aa23.52■■□□□ 1.36
C6orf48-205ENST00000375640 TNRC18O15417 2968 aaPredicted RBP23.52■■□□□ 1.36
C6orf48-205ENST00000375640 MKI67P46013 3256 aaKnown RBP23.51■■□□□ 1.35
C6orf48-205ENST00000375640 SGSM2O43147 1006 aa23.51■■□□□ 1.35
C6orf48-205ENST00000375640 CYBAP13498 195 aa23.51■■□□□ 1.35
C6orf48-205ENST00000375640 CNGA1P29973 690 aa23.51■■□□□ 1.35
C6orf48-205ENST00000375640 TKFCQ3LXA3 575 aa23.51■■□□□ 1.35
C6orf48-205ENST00000375640 TRPV1Q8NER1 839 aa23.51■■□□□ 1.35
C6orf48-205ENST00000375640 ZSWIM5Q9P217 1185 aa23.51■■□□□ 1.35
C6orf48-205ENST00000375640 NRBP1Q9UHY1 535 aa23.51■■□□□ 1.35
C6orf48-205ENST00000375640 B4E1Z4 1266 aa23.5■■□□□ 1.35
C6orf48-205ENST00000375640 PDHBP11177 359 aa23.5■■□□□ 1.35
C6orf48-205ENST00000375640 MNX1P50219 401 aaPredicted RBP23.5■■□□□ 1.35
C6orf48-205ENST00000375640 MSL3Q8N5Y2 521 aaKnown RBP23.5■■□□□ 1.35
C6orf48-205ENST00000375640 ZKSCAN3Q9BRR0 538 aa23.5■■□□□ 1.35
C6orf48-205ENST00000375640 TINF2Q9BSI4 451 aa23.5■■□□□ 1.35
C6orf48-205ENST00000375640 U3KPZ7 1027 aaPredicted RBP23.5■■□□□ 1.35
C6orf48-205ENST00000375640 DNAJC25-GNG10A0A024R161 153 aa23.49■■□□□ 1.35
C6orf48-205ENST00000375640 PTH1RQ03431 593 aa23.49■■□□□ 1.35
C6orf48-205ENST00000375640 TTBK2Q6IQ55 1244 aa23.49■■□□□ 1.35
C6orf48-205ENST00000375640 RASGRP2Q7LDG7 609 aa23.49■■□□□ 1.35
C6orf48-205ENST00000375640 ANKRD35Q8N283 1001 aa23.49■■□□□ 1.35
C6orf48-205ENST00000375640 DIS3LQ8TF46 1054 aaKnown RBP23.49■■□□□ 1.35
C6orf48-205ENST00000375640 ZSCAN10Q96SZ4 725 aaPredicted RBP23.49■■□□□ 1.35
C6orf48-205ENST00000375640 ZNF536O15090 1300 aa23.49■■□□□ 1.35
C6orf48-205ENST00000375640 SEPT4O43236 478 aa23.48■■□□□ 1.35
C6orf48-205ENST00000375640 SNHG28P0DPA3 235 aa23.48■■□□□ 1.35
C6orf48-205ENST00000375640 AGBL1Q96MI9 1066 aa23.48■■□□□ 1.35
C6orf48-205ENST00000375640 NR2E3Q9Y5X4 410 aa23.48■■□□□ 1.35
C6orf48-205ENST00000375640 PDE4DIPQ5VU43 2346 aa23.48■■□□□ 1.35
C6orf48-205ENST00000375640 ZNF543Q08ER8 600 aa23.47■■□□□ 1.35
C6orf48-205ENST00000375640 PRAMEF19Q5SWL8 479 aa23.47■■□□□ 1.35
C6orf48-205ENST00000375640 SYDE2Q5VT97 1194 aa23.47■■□□□ 1.35
C6orf48-205ENST00000375640 RANBP17Q9H2T7 1088 aaKnown RBP23.47■■□□□ 1.35
C6orf48-205ENST00000375640 C11orf49Q9H6J7 331 aa23.47■■□□□ 1.35
C6orf48-205ENST00000375640 ACAD9Q9H845 621 aa23.47■■□□□ 1.35
C6orf48-205ENST00000375640 GPCPD1Q9NPB8 672 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms