RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 IVNS1ABPQ9Y6Y0 642 aa18.48■□□□□ 0.55
SDHB-201ENST00000375499 NEDD4P46934 1319 aa18.48■□□□□ 0.55
SDHB-201ENST00000375499 ALPK3Q96L96 1907 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 COBLO75128 1261 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 IGHA2P01877 340 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 HOXC6P09630 235 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 NCAPG2Q86XI2 1143 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 PLXNA1Q9UIW2 1896 aa18.47■□□□□ 0.55
SDHB-201ENST00000375499 CCND3P30281 292 aaPredicted RBP18.46■□□□□ 0.55
SDHB-201ENST00000375499 NOVP48745 357 aa18.46■□□□□ 0.55
SDHB-201ENST00000375499 RIOX2Q8IUF8 465 aa18.46■□□□□ 0.55
SDHB-201ENST00000375499 DEFB123Q8N688 67 aa18.46■□□□□ 0.55
SDHB-201ENST00000375499 STAG1Q8WVM7 1258 aa18.46■□□□□ 0.55
SDHB-201ENST00000375499 TOMM22Q9NS69 142 aa18.46■□□□□ 0.55
SDHB-201ENST00000375499 SYNPO2Q9UMS6 1093 aa18.46■□□□□ 0.55
SDHB-201ENST00000375499 STX8Q9UNK0 236 aa18.46■□□□□ 0.55
SDHB-201ENST00000375499 HIP1O00291 1037 aa18.45■□□□□ 0.54
SDHB-201ENST00000375499 AKNAD1Q5T1N1 836 aa18.45■□□□□ 0.54
SDHB-201ENST00000375499 TRMT44Q8IYL2 757 aaKnown RBP18.45■□□□□ 0.54
SDHB-201ENST00000375499 TDHQ8IZJ6 230 aa18.45■□□□□ 0.54
SDHB-201ENST00000375499 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
SDHB-201ENST00000375499 OGDHLQ9ULD0 1010 aa18.45■□□□□ 0.54
SDHB-201ENST00000375499 RIPK3Q9Y572 518 aa18.45■□□□□ 0.54
SDHB-201ENST00000375499 BMP3P12645 472 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 CYP2C19P33261 490 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 STAT3P40763 770 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
SDHB-201ENST00000375499 C7orf61Q8IZ16 206 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 TRPV1Q8NER1 839 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 KIFC2Q96AC6 838 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 DSCC1Q9BVC3 393 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 MROH8Q9H579 483 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 C11orf49Q9H6J7 331 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 MTMR7Q9Y216 660 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 A0A0C4DFX4 3053 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 COL6A3P12111 3177 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 SMCHD1A6NHR9 2005 aa18.44■□□□□ 0.54
SDHB-201ENST00000375499 MCCP23508 829 aa18.43■□□□□ 0.54
SDHB-201ENST00000375499 KCTD1Q719H9 257 aa18.43■□□□□ 0.54
SDHB-201ENST00000375499 PRPF38AQ8NAV1 312 aaKnown RBP18.43■□□□□ 0.54
SDHB-201ENST00000375499 GMCL1Q96IK5 515 aa18.43■□□□□ 0.54
SDHB-201ENST00000375499 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
SDHB-201ENST00000375499 TMEM232C9JQI7 657 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 STRNO43815 780 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 SLC25A27O95847 323 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 PGK2P07205 417 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 CHMLP26374 656 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 SNRNP48Q6IEG0 339 aaKnown RBP18.42■□□□□ 0.54
SDHB-201ENST00000375499 RCSD1Q6JBY9 416 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 MFSD6Q6ZSS7 791 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 DPP9Q86TI2 863 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 CPXCR1Q8N123 301 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 RAVER2Q9HCJ3 691 aaKnown RBP18.42■□□□□ 0.54
SDHB-201ENST00000375499 MTMR10Q9NXD2 777 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 FEM1BQ9UK73 627 aa18.42■□□□□ 0.54
SDHB-201ENST00000375499 LAMA3Q16787 3333 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 CYBAP13498 195 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 TAL1P17542 331 aaPredicted RBP18.41■□□□□ 0.54
SDHB-201ENST00000375499 SLC1A4P43007 532 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 LHX8Q68G74 356 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 ABRAQ8N0Z2 381 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 MMP19Q99542 508 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 TMEM47Q9BQJ4 181 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 ZKSCAN3Q9BRR0 538 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 TEX13BQ9BXU2 312 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 TCP11L1Q9NUJ3 509 aa18.41■□□□□ 0.54
SDHB-201ENST00000375499 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
SDHB-201ENST00000375499 ZNF213O14771 459 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 ATP2A1O14983 1001 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 FCER1AP12319 257 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 MAGEA10P43363 369 aaPredicted RBP18.4■□□□□ 0.54
SDHB-201ENST00000375499 STAT2P52630 851 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 SNAP25P60880 206 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 PTH1RQ03431 593 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 MFSD14CQ5VZR4 134 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 OLFML2BQ68BL8 750 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 FAM109BQ6ICB4 259 aaPredicted RBP18.4■□□□□ 0.54
SDHB-201ENST00000375499 MAML3Q96JK9 1138 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 UBE2OQ9C0C9 1292 aaKnown RBP18.4■□□□□ 0.54
SDHB-201ENST00000375499 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
SDHB-201ENST00000375499 ZNF536O15090 1300 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 RAD50Q92878 1312 aa18.4■□□□□ 0.54
SDHB-201ENST00000375499 MCM3APO60318 1980 aa18.39■□□□□ 0.53
SDHB-201ENST00000375499 B4E1Z4 1266 aa18.39■□□□□ 0.53
SDHB-201ENST00000375499 SLC4A3P48751 1232 aa18.39■□□□□ 0.53
SDHB-201ENST00000375499 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.53
SDHB-201ENST00000375499 TTBK2Q6IQ55 1244 aa18.39■□□□□ 0.53
SDHB-201ENST00000375499 LCTP09848 1927 aa18.39■□□□□ 0.53
SDHB-201ENST00000375499 ZBED4O75132 1171 aa18.38■□□□□ 0.53
SDHB-201ENST00000375499 KDM4AO75164 1064 aa18.38■□□□□ 0.53
SDHB-201ENST00000375499 TOP1P11387 765 aaKnown RBP18.38■□□□□ 0.53
SDHB-201ENST00000375499 PCP11498 1178 aaKnown RBP18.38■□□□□ 0.53
SDHB-201ENST00000375499 CCDC96Q2M329 555 aa18.38■□□□□ 0.53
SDHB-201ENST00000375499 ZNF792Q3KQV3 632 aa18.38■□□□□ 0.53
SDHB-201ENST00000375499 PRAMEF19Q5SWL8 479 aa18.38■□□□□ 0.53
SDHB-201ENST00000375499 RNF41Q9H4P4 317 aaPredicted RBP18.38■□□□□ 0.53
SDHB-201ENST00000375499 TAF6LQ9Y6J9 622 aa18.38■□□□□ 0.53
SDHB-201ENST00000375499 FRMPD2Q68DX3 1309 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms