RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PAX7P23759 505 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 GGCXP38435 758 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
C9orf3-203ENST00000375315 GUCY1B3Q02153 619 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 NAIF1Q69YI7 327 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-203ENST00000375315 RALYLQ86SE5 291 aaKnown RBP13.64□□□□□ -0.23
C9orf3-203ENST00000375315 NAA15Q9BXJ9 866 aaKnown RBP13.64□□□□□ -0.23
C9orf3-203ENST00000375315 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 INTS13Q9NVM9 706 aa13.64□□□□□ -0.23
C9orf3-203ENST00000375315 RIN2Q8WYP3 895 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-203ENST00000375315 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.63□□□□□ -0.23
C9orf3-203ENST00000375315 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 MYH15Q9Y2K3 1946 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 B4E1Z4 1266 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 AKR1B15C9JRZ8 316 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-203ENST00000375315 MEFVO15553 781 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-203ENST00000375315 MTF1Q14872 753 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 DZIP1Q86YF9 867 aaKnown RBP13.63□□□□□ -0.23
C9orf3-203ENST00000375315 SLC35F6Q8N357 371 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 NOA1Q8NC60 698 aaKnown RBP13.63□□□□□ -0.23
C9orf3-203ENST00000375315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.63□□□□□ -0.23
C9orf3-203ENST00000375315 PANX2Q96RD6 677 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 POLLQ9UGP5 575 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
C9orf3-203ENST00000375315 KLHL33A6NCF5 533 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 CDR1P51861 262 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 ZKSCAN8Q15776 578 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-203ENST00000375315 WLSQ5T9L3 541 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 SOWAHDA6NJG2 315 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 NDUFAB1O14561 156 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 PFKFB1P16118 471 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 CMA1P23946 247 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 CEP85LQ5SZL2 805 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 ILDR1Q86SU0 546 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-203ENST00000375315 STRBPQ96SI9 672 aaKnown RBP13.62□□□□□ -0.23
C9orf3-203ENST00000375315 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 KLC4Q9NSK0 619 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 POLR3EQ9NVU0 708 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 SAMM50Q9Y512 469 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
C9orf3-203ENST00000375315 BAG6P46379 1132 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 USP14P54578 494 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 MECOMQ03112 1051 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 MYL10Q9BUA6 226 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 RABEP2Q9H5N1 569 aa13.62□□□□□ -0.23
C9orf3-203ENST00000375315 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
C9orf3-203ENST00000375315 MAGEB6P1A0A0J9YX57 407 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-203ENST00000375315 GTF2IP78347 998 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 IFNL3Q8IZI9 196 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 HOOK1Q9UJC3 728 aaKnown RBP13.61□□□□□ -0.23
C9orf3-203ENST00000375315 MYO6Q9UM54 1294 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 CLIC4Q9Y696 253 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 DDX60Q8IY21 1712 aaKnown RBP13.61□□□□□ -0.23
C9orf3-203ENST00000375315 XDHP47989 1333 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 GOLGA6BA6NDN3 693 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 SYKP43405 635 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 CLNS1AP54105 237 aaKnown RBP13.61□□□□□ -0.23
C9orf3-203ENST00000375315 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 CAMKK2Q96RR4 588 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-203ENST00000375315 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-203ENST00000375315 MYO1AQ9UBC5 1043 aa13.61□□□□□ -0.23
C9orf3-203ENST00000375315 ZC3H4Q9UPT8 1303 aaKnown RBP13.6□□□□□ -0.23
C9orf3-203ENST00000375315 MYO5AQ9Y4I1 1855 aaKnown RBP13.6□□□□□ -0.23
C9orf3-203ENST00000375315 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 SMTNP53814 917 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 UBE3CQ15386 1083 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 SYNE3Q6ZMZ3 975 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 GRIN2DO15399 1336 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 GOLGA8KD6RF30 607 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 IRF6O14896 467 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 EZRP15311 586 aaKnown RBP13.6□□□□□ -0.23
C9orf3-203ENST00000375315 TTC19Q6DKK2 380 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-203ENST00000375315 FBXO33Q7Z6M2 555 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 ZNF384Q8TF68 577 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 KCNQ5Q9NR82 932 aa13.6□□□□□ -0.23
C9orf3-203ENST00000375315 PRC1O43663 620 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 HMGB1P09429 215 aaKnown RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 PLCB4Q15147 1175 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 CCDC50Q8IVM0 306 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 EHD4Q9H223 541 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 CENPHQ9H3R5 247 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 TARSL2A2RTX5 802 aaKnown RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 CCDC40Q4G0X9 1142 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 DHX32Q7L7V1 743 aaKnown RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 YTHDF3Q7Z739 585 aaKnown RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 TBC1D16Q8TBP0 767 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 ZC3H12CQ9C0D7 883 aaKnown RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 SENP2Q9HC62 589 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms