RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PLCB4Q15147 1175 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 FAM129AQ9BZQ8 928 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
PTCH1-204ENST00000375290 MORC3Q14149 939 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 KRT39Q6A163 491 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 GADD45BO75293 160 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-204ENST00000375290 MED14O60244 1454 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 CASP8Q14790 479 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 TRPM1Q7Z4N2 1603 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 ADGRL3Q9HAR2 1447 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 VPS16Q9H269 839 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 PSMD7P51665 324 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 XAGE3Q8WTP9 111 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 IFT122Q9HBG6 1241 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 NDE1Q9NXR1 346 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 ADAM21Q9UKJ8 722 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 NNTQ13423 1086 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 CCDC89Q8N998 374 aa11.19□□□□□ -0.62
PTCH1-204ENST00000375290 IL13P35225 146 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 SH3TC1Q8TE82 1336 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 KIRREL3Q8IZU9 778 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 MID2Q9UJV3 735 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 IBSPP21815 317 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-204ENST00000375290 STX17P56962 302 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
PTCH1-204ENST00000375290 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 COPS6Q7L5N1 327 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 SERPINI1Q99574 410 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-204ENST00000375290 THAP9Q9H5L6 903 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 NR1D1P20393 614 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 ZBED6P86452 979 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-204ENST00000375290 LRRC8CQ8TDW0 803 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 SDCCAG3Q96C92 435 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 TACC3Q9Y6A5 838 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 CSRNP1Q96S65 589 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 PPANQ9NQ55 473 aaKnown RBP11.18□□□□□ -0.62
PTCH1-204ENST00000375290 LRWD1Q9UFC0 647 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 DNM3Q9UQ16 869 aa11.18□□□□□ -0.62
PTCH1-204ENST00000375290 E7EWF7 191 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 TTI1O43156 1089 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 REXO1Q8N1G1 1221 aaKnown RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 PA2G4Q9UQ80 394 aaKnown RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 KPNA2P52292 529 aaKnown RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 TEX9Q8N6V9 391 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 CDC42BPAQ5VT25 1732 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 FNBP1Q96RU3 617 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 PFDN1O60925 122 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 P4HA1P13674 534 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 HSPA1LP34931 641 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 ST13P4Q8IZP2 240 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 CDKL2Q92772 493 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 STAMBPL1Q96FJ0 436 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 ALCAMQ13740 583 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 PSMD1Q99460 953 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 BICC1Q9H694 974 aaKnown RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 RASGRF2O14827 1237 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 MYOCDQ8IZQ8 938 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 MORC4Q8TE76 937 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 CCDC124Q96CT7 223 aaKnown RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 SLF1Q9BQI6 1058 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 GSPT1P15170 499 aaKnown RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 LPIN2Q92539 896 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 PCDHA7Q9UN72 937 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 RNF8O76064 485 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 GCFC2P16383 781 aaKnown RBP11.17□□□□□ -0.62
PTCH1-204ENST00000375290 TFCP2Q12800 502 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 CARD14Q9BXL6 1004 aa11.17□□□□□ -0.62
PTCH1-204ENST00000375290 UBE3CQ15386 1083 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 CARD10Q9BWT7 1032 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 MIF4GDA9UHW6 222 aaKnown RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 GPAA1O43292 621 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 PLA2G4DQ86XP0 818 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 SENP1Q9P0U3 644 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 NCAPD2Q15021 1401 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 GOLGA8CPA6NN73 597 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 NEK9Q8TD19 979 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 HAUS7Q99871 368 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 FAF1Q9UNN5 650 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 ARHGAP10A1A4S6 786 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 LRRC63Q05C16 580 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 MTHFSDQ2M296 383 aaKnown RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 PDZD4Q76G19 769 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-204ENST00000375290 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 CALCRLQ16602 461 aa11.16□□□□□ -0.62
PTCH1-204ENST00000375290 DCAF17Q5H9S7 520 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms