RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
HLA-DMA-201ENST00000374843 SEC63Q9UGP8 760 aaKnown RBP19.9■□□□□ 0.78
HLA-DMA-201ENST00000374843 FEM1BQ9UK73 627 aa19.9■□□□□ 0.78
HLA-DMA-201ENST00000374843 PASKQ96RG2 1323 aa19.9■□□□□ 0.78
HLA-DMA-201ENST00000374843 hCG_1642624A0A1W2PR95 340 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 TMEM232C9JQI7 657 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 CXCL11O14625 94 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 SLC16A2P36021 539 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 RESTQ13127 1097 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 PARP14Q460N5 1801 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 KRT40Q6A162 431 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 CLEC17AQ6ZS10 378 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 TNPO1Q92973 898 aaKnown RBP19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 PIGSQ96S52 555 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 ZNF408Q9H9D4 720 aa19.89■□□□□ 0.77
HLA-DMA-201ENST00000374843 A0A0G2JLL6 359 aaPredicted RBP19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 PNMA6FA0A0J9YX94 578 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 STXBP3O00186 592 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 ZBTB5O15062 677 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 XBP1P17861 261 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 TRIM29Q14134 588 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 WWC2Q6AWC2 1192 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 PPP1R18Q6NYC8 613 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 PRRT2Q7Z6L0 340 aaPredicted RBP19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 C2orf69Q8N8R5 385 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 CNKSR2Q8WXI2 1034 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 GJB4Q9NTQ9 266 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 BARHL2Q9NY43 387 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 PRR12Q9ULL5 1215 aa19.88■□□□□ 0.77
HLA-DMA-201ENST00000374843 MMP1P03956 469 aa19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 FOSBP53539 338 aa19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 HMGCS2P54868 508 aa19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 CST9Q5W186 159 aa19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 OTUD5Q96G74 571 aa19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 PHF20Q9BVI0 1012 aa19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 RANBP17Q9H2T7 1088 aaKnown RBP19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 VPS54Q9P1Q0 977 aa19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 ISY1Q9ULR0 285 aaKnown RBP19.87■□□□□ 0.77
HLA-DMA-201ENST00000374843 ESYT2A0FGR8 921 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 IRF6O14896 467 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 GUCY1B3Q02153 619 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 KIF23Q02241 960 aaPredicted RBP19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 DGKZQ13574 1117 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 NPY5RQ15761 445 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 CDC37Q16543 378 aaPredicted RBP19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 OTUD7BQ6GQQ9 843 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 HOMER1Q86YM7 354 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 PROCA1Q8NCQ7 364 aaPredicted RBP19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 SMC1BQ8NDV3 1235 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 CCDC148Q8NFR7 591 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 OPTNQ96CV9 577 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 SLF1Q9BQI6 1058 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 ZSCAN16Q9H4T2 348 aaPredicted RBP19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 RPAP3Q9H6T3 665 aaPredicted RBP19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 TMOD4Q9NZQ9 345 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 RLFQ13129 1914 aa19.86■□□□□ 0.77
HLA-DMA-201ENST00000374843 MYPNQ86TC9 1320 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 PPP1R11O60927 126 aaPredicted RBP19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 GJA5P36382 358 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 QRICH1Q2TAL8 776 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 GALNT17Q6IS24 598 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 TYW1BQ6NUM6 668 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 HEATR3Q7Z4Q2 680 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 DAGLBQ8NCG7 672 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 CCDC12Q8WUD4 166 aaPredicted RBP19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 PIBF1Q8WXW3 757 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 GPKOWQ92917 476 aaPredicted RBP eCLIP19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 VAT1LQ9HCJ6 419 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 FBXO28Q9NVF7 368 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 PPP1R9AQ9ULJ8 1098 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 ATP6V1DQ9Y5K8 247 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 BAZ2BQ9UIF8 2168 aaKnown RBP19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 A0A0G2JMZ2 1700 aa19.85■□□□□ 0.77
HLA-DMA-201ENST00000374843 U2AF2P26368 475 aaKnown RBP eCLIP19.84■□□□□ 0.77
HLA-DMA-201ENST00000374843 CALML3P27482 149 aa19.84■□□□□ 0.77
HLA-DMA-201ENST00000374843 IKQ13123 557 aaPredicted RBP19.84■□□□□ 0.77
HLA-DMA-201ENST00000374843 BRAPQ7Z569 592 aa19.84■□□□□ 0.77
HLA-DMA-201ENST00000374843 WNK4Q96J92 1243 aa19.84■□□□□ 0.77
HLA-DMA-201ENST00000374843 TANGO6Q9C0B7 1094 aa19.84■□□□□ 0.77
HLA-DMA-201ENST00000374843 KCNJ14Q9UNX9 436 aa19.84■□□□□ 0.77
HLA-DMA-201ENST00000374843 MYH15Q9Y2K3 1946 aa19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 FDX1P10109 184 aa19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 MOGSQ13724 837 aa19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 SAFBQ15424 915 aaKnown RBP eCLIP19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 FOXD4L5Q5VV16 416 aaPredicted RBP19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 FERMT3Q86UX7 667 aa19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 DIS3L2Q8IYB7 885 aaKnown RBP19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 PRPF38AQ8NAV1 312 aaKnown RBP19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 FOXD4L4Q8WXT5 416 aaPredicted RBP19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 SLC10A4Q96EP9 437 aa19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 ZMYND12Q9H0C1 365 aa19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 FOXP1Q9H334 677 aaPredicted RBP19.83■□□□□ 0.77
HLA-DMA-201ENST00000374843 KIF28PB7ZC32 967 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L15C9J2P7 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L13C9JLJ4 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L11C9JVI0 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L18D6R9N7 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L22D6RA61 530 aa19.82■□□□□ 0.76
HLA-DMA-201ENST00000374843 USP17L17D6RBQ6 530 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms