RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 VWA5AO00534 786 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 HSPA8P11142 646 aaKnown RBP13.26□□□□□ -0.29
HSPG2-202ENST00000374676 SP3Q02447 781 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 TTBK2Q6IQ55 1244 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 APOA5Q6Q788 366 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 ANKRD13CQ8N6S4 541 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 GPRC5AQ8NFJ5 357 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 BRF1Q92994 677 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 CHMP4CQ96CF2 233 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 MAD2L2Q9UI95 211 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 BRPF3Q9ULD4 1205 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
HSPG2-202ENST00000374676 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 FRMPD2Q68DX3 1309 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-202ENST00000374676 KLF18A0A0U1RQI7 1052 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 ZBTB43O43298 467 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 FKTNO75072 461 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 ZBED4O75132 1171 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 CNMDO75829 334 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 GOLGA8HP0CJ92 632 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 KIF5BP33176 963 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 NEK4P51957 841 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 ERVK-24P63145 666 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-202ENST00000374676 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 Q3C1V9 767 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 FANCBQ8NB91 859 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 REPS2Q8NFH8 660 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-202ENST00000374676 NUP133Q8WUM0 1156 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 KIFC2Q96AC6 838 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 LZTS2Q9BRK4 669 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 TXNRD2Q9NNW7 524 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
HSPG2-202ENST00000374676 MYH6P13533 1939 aa13.25□□□□□ -0.29
HSPG2-202ENST00000374676 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 KLRF2D3W0D1 207 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 ATP2A1O14983 1001 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 GNAQP50148 359 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 OAZ1P54368 228 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 APOBRQ0VD83 1088 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-202ENST00000374676 RABEP1Q15276 862 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 ZNF296Q8WUU4 475 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-202ENST00000374676 ZNF274Q96GC6 653 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-202ENST00000374676 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 MYL10Q9BUA6 226 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 MGAMO43451 1857 aa13.24□□□□□ -0.29
HSPG2-202ENST00000374676 SLC16A2P36021 539 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 STAT3P40763 770 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 LBX1P52954 281 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 CCNA1P78396 465 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 TMEM132BQ14DG7 1078 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-202ENST00000374676 MICU3Q86XE3 530 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 ERO1AQ96HE7 468 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 SPATC1LQ9H0A9 340 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 RANBP17Q9H2T7 1088 aaKnown RBP13.23□□□□□ -0.29
HSPG2-202ENST00000374676 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
HSPG2-202ENST00000374676 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
HSPG2-202ENST00000374676 ZNF214Q9UL59 606 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-202ENST00000374676 NID2Q14112 1375 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 ZNFX1Q9P2E3 1918 aaKnown RBP13.22□□□□□ -0.29
HSPG2-202ENST00000374676 PEX10O60683 326 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 SLC25A27O95847 323 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 RXRAP19793 462 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
HSPG2-202ENST00000374676 COPB2P35606 906 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 AK2P54819 239 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 LACTBP83111 547 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-202ENST00000374676 KIF22Q14807 665 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 ARHGEF6Q15052 776 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 SHCBP1Q8NEM2 672 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 TEX13BQ9BXU2 312 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 CPVLQ9H3G5 476 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 PRDM10Q9NQV6 1147 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 FAM217BQ9NTX9 383 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-202ENST00000374676 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
HSPG2-202ENST00000374676 CTDP1Q9Y5B0 961 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-202ENST00000374676 ZNF536O15090 1300 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 CCDC196A0A1B0GTZ2 297 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 GOLGA8AA7E2F4 631 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 GOLGA8BA8MQT2 603 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 MAPK4P31152 587 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.294e-7■■■□□ 16
HSPG2-202ENST00000374676 RTN1Q16799 776 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 SLC35G1Q2M3R5 365 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms