RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 SERPINB13Q9UIV8 391 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 ILDR1Q86SU0 546 aaPredicted RBP15.2■□□□□ 0.02
CLIC4-201ENST00000374379 PPP2R2CQ9Y2T4 447 aa15.2■□□□□ 0.02
CLIC4-201ENST00000374379 BICDL2A1A5D9 508 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 DDX39AO00148 427 aaKnown RBP15.19■□□□□ 0.02
CLIC4-201ENST00000374379 IKBKBO14920 756 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 CUL4BQ13620 913 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 WDR78Q5VTH9 848 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 CCDC174Q6PII3 467 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 VGLL2Q8N8G2 317 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 CEP95Q96GE4 821 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 DCAF17Q5H9S7 520 aaPredicted RBP15.19■□□□□ 0.02
CLIC4-201ENST00000374379 ERO1AQ96HE7 468 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 ETF1P62495 437 aaKnown RBP15.19■□□□□ 0.02
CLIC4-201ENST00000374379 EVX2Q03828 476 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 ERMNQ8TAM6 284 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 PSTPIP2Q9H939 334 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 HOMER2Q9NSB8 354 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 TCHHQ07283 1943 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 TCRBV5S4A2TA0A5A2 114 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 PPP1R12BO60237 982 aaPredicted RBP15.19■□□□□ 0.02
CLIC4-201ENST00000374379 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 ZFP91Q96JP5 570 aaPredicted RBP15.19■□□□□ 0.02
CLIC4-201ENST00000374379 CCDC94Q9BW85 323 aaPredicted RBP15.19■□□□□ 0.02
CLIC4-201ENST00000374379 NLRC4Q9NPP4 1024 aa15.19■□□□□ 0.02
CLIC4-201ENST00000374379 XRN1Q8IZH2 1706 aaKnown RBP15.18■□□□□ 0.02
CLIC4-201ENST00000374379 GTPBP6O43824 516 aaPredicted RBP15.18■□□□□ 0.02
CLIC4-201ENST00000374379 TERF1P54274 439 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 LRRC41Q15345 812 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 CERKLQ49MI3 558 aaPredicted RBP15.18■□□□□ 0.02
CLIC4-201ENST00000374379 AGXT2Q9BYV1 514 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 CTAGE15A4D2H0 777 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 TMCO5BA8MYB1 307 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 PHACTR2O75167 634 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 CTAGE8P0CG41 777 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 CYP4A11Q02928 519 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 PPP2R3AQ06190 1150 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 CTAGE6Q86UF2 777 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 CTAGE4Q8IX94 777 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 LZTS2Q9BRK4 669 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 HDAC9Q9UKV0 1011 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 TAF3Q5VWG9 929 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 NLGN1Q8N2Q7 840 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 CRACR2AQ9BSW2 395 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 PCDHA1Q9Y5I3 950 aa15.18■□□□□ 0.02
CLIC4-201ENST00000374379 UBXN2AP68543 259 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 PRR16Q569H4 304 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 DGKHQ86XP1 1220 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 GSDMAQ96QA5 445 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 NBPF3Q9H094 633 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 ARFGAP3Q9NP61 516 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 FBXO2Q9UK22 296 aaPredicted RBP15.17■□□□□ 0.02
CLIC4-201ENST00000374379 RGPD2P0DJD1 1756 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 TRIM49BA6NDI0 452 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 KIF20AO95235 890 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 RBL2Q08999 1139 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 TRIML1Q8N9V2 468 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 TAF4BQ92750 862 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 KIFC2Q96AC6 838 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 POLD4Q9HCU8 107 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 PCDHA12Q9UN75 941 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 CDC25BP30305 580 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 BMS1Q14692 1282 aaKnown RBP15.17■□□□□ 0.02
CLIC4-201ENST00000374379 PFKFB3Q16875 520 aaPredicted RBP15.17■□□□□ 0.02
CLIC4-201ENST00000374379 CNNM4Q6P4Q7 775 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 SARM1Q6SZW1 724 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 FBXO33Q7Z6M2 555 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 TMEM260Q9NX78 707 aa15.17■□□□□ 0.02
CLIC4-201ENST00000374379 SOWAHDA6NJG2 315 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 RNASE9P60153 205 aaKnown RBP15.16■□□□□ 0.02
CLIC4-201ENST00000374379 PDE6BP35913 854 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 CHMP4BP1P59074 171 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 ICA1Q05084 483 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 TNIP1Q15025 636 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 SLFN13Q68D06 897 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 KRT222Q8N1A0 295 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 NEK11Q8NG66 645 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 MED1Q15648 1581 aaPredicted RBP15.16■□□□□ 0.02
CLIC4-201ENST00000374379 TEX33O43247 280 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 LONP1P36776 959 aaKnown RBP15.16■□□□□ 0.02
CLIC4-201ENST00000374379 C12orf60Q5U649 245 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 RIOK1Q9BRS2 568 aaKnown RBP15.16■□□□□ 0.02
CLIC4-201ENST00000374379 LRRC27Q9C0I9 530 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 RAD17O75943 681 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 PLCG1P19174 1290 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 PAFAH1B1P43034 410 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 FMR1Q06787 632 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLIC4-201ENST00000374379 VPS72Q15906 364 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 NTRK3Q16288 839 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 ZMYND15Q9H091 742 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 GJA3Q9Y6H8 435 aa15.16■□□□□ 0.02
CLIC4-201ENST00000374379 TNS2Q63HR2 1409 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 SLIT3O75094 1523 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms