RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RPN1P04843 607 aaKnown RBP15.66■□□□□ 0.1
LMX1B-202ENST00000373474 PCCAP05165 728 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-202ENST00000373474 SATB1Q01826 763 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 TRPM1Q7Z4N2 1603 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 CDK12Q9NYV4 1490 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-202ENST00000373474 TOM1O60784 492 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 SP4Q02446 784 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 GALNT17Q6IS24 598 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 RAB17Q9H0T7 212 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 PARP2Q9UGN5 583 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 DKC1O60832 514 aaKnown RBP eCLIP15.66■□□□□ 0.1
LMX1B-202ENST00000373474 CNGA1P29973 690 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 HSP90AA5PQ58FG0 334 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 CCNL1Q9UK58 526 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-202ENST00000373474 CRCPO75575 148 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 SLC1A4P43007 532 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 RABEP2Q9H5N1 569 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 TLR7Q9NYK1 1049 aaKnown RBP15.66■□□□□ 0.1
LMX1B-202ENST00000373474 GPIHBP1Q8IV16 184 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 POLR3EQ9NVU0 708 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 FAF1Q9UNN5 650 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-202ENST00000373474 RIPOR2Q9Y4F9 1068 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 TNKSO95271 1327 aa15.66■□□□□ 0.1
LMX1B-202ENST00000373474 LRRD1A4D1F6 860 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 ASIC3Q9UHC3 531 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 NRBP1Q9UHY1 535 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 LGSNQ5TDP6 509 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 MYOCDQ8IZQ8 938 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 IGSF1Q8N6C5 1336 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 NSUN7Q8NE18 718 aaKnown RBP15.65■□□□□ 0.1
LMX1B-202ENST00000373474 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 GABPB2Q8TAK5 448 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-202ENST00000373474 WHAMMQ8TF30 809 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 SYMPKQ92797 1274 aaKnown RBP15.65■□□□□ 0.1
LMX1B-202ENST00000373474 M0R2C6 588 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 EXOC3O60645 756 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 SCG2P13521 617 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 TTLL7Q6ZT98 887 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 MAIP1Q8WWC4 291 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 HAUS4Q9H6D7 363 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 LONP1P36776 959 aaKnown RBP15.65■□□□□ 0.1
LMX1B-202ENST00000373474 SLC39A14Q15043 492 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 UBE3CQ15386 1083 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 ZNF827Q17R98 1081 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 AMFRQ9UKV5 643 aa15.65■□□□□ 0.1
LMX1B-202ENST00000373474 IKBKBO14920 756 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 DNAJC8O75937 253 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-202ENST00000373474 SNCBQ16143 134 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 LONRF2Q1L5Z9 754 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 ANKRD20A3Q5VUR7 823 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 DENND2CQ68D51 928 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 TBC1D31Q96DN5 1066 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 ATP8A2Q9NTI2 1148 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 EFCAB6Q5THR3 1501 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 FMNL1O95466 1100 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-202ENST00000373474 GSDMBQ8TAX9 411 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 DBNLQ9UJU6 430 aaKnown RBP15.64■□□□□ 0.09
LMX1B-202ENST00000373474 BTBD18B2RXH4 712 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 USP17L12C9JPN9 530 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 USP17L21D6R901 530 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 SH3BP5O60239 455 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 TECP42680 631 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 ITIH3Q06033 890 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 RAD51AP2Q09MP3 1159 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 C11orf57Q6ZUT1 292 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-202ENST00000373474 ZNF589Q86UQ0 364 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-202ENST00000373474 CCDC105Q8IYK2 499 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 PFDN1O60925 122 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 USH1GQ495M9 461 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 FOXP1Q9H334 677 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-202ENST00000373474 FAM204AQ9H8W3 233 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 DDX41Q9UJV9 622 aaKnown RBP15.64■□□□□ 0.09
LMX1B-202ENST00000373474 ADCY10Q96PN6 1610 aa15.64■□□□□ 0.09
LMX1B-202ENST00000373474 OR52Z1P0C646 297 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 TROVE2P10155 538 aaKnown RBP eCLIP15.63■□□□□ 0.09
LMX1B-202ENST00000373474 SIRT2Q8IXJ6 389 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 PHLPP2Q6ZVD8 1323 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 COG7P83436 770 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 PFDN4Q9NQP4 134 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 PCP11498 1178 aaKnown RBP15.63■□□□□ 0.09
LMX1B-202ENST00000373474 HARSP12081 509 aaKnown RBP15.63■□□□□ 0.09
LMX1B-202ENST00000373474 GPBP1Q86WP2 473 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 FAM71BQ8TC56 605 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 COPB1P53618 953 aaKnown RBP15.63■□□□□ 0.09
LMX1B-202ENST00000373474 TBC1D22AQ8WUA7 517 aa15.63■□□□□ 0.09
LMX1B-202ENST00000373474 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
LMX1B-202ENST00000373474 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
LMX1B-202ENST00000373474 U2AF1L4Q8WU68 220 aaKnown RBP15.62■□□□□ 0.09
LMX1B-202ENST00000373474 SDR42E1Q8WUS8 393 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 STAG1Q8WVM7 1258 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 OPHN1O60890 802 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 CYP21A2P08686 494 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 GNGT1P63211 74 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 MAEAQ7L5Y9 396 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 MAGEF1Q9HAY2 307 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 MED4Q9NPJ6 270 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 PANK4Q9NVE7 773 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 GDAP1L1Q96MZ0 367 aa15.62■□□□□ 0.09
LMX1B-202ENST00000373474 ATP8B1O43520 1251 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms