RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 KRT12Q99456 494 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 DOK7Q18PE1 504 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 WHAMMP3Q1A5X7 153 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 PSTPIP2Q9H939 334 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 SEPT10Q9P0V9 454 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 TACC3Q9Y6A5 838 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 ZMYND10O75800 440 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 PDIA3P30101 505 aaKnown RBP26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 RAB17Q9H0T7 212 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 VCX3BQ9H321 246 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 DDX25Q9UHL0 483 aaKnown RBP26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 ARHGEF10O15013 1369 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 K7ENM7 598 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 FTOQ9C0B1 505 aaKnown RBP eCLIP26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 GPHNQ9NQX3 736 aaPredicted RBP26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 PTPN22Q9Y2R2 807 aa26.35■■□□□ 1.81
RAPGEF1-203ENST00000372195 MAST3O60307 1309 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 STAT1P42224 750 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 TCIRG1Q13488 830 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 TRIM58Q8NG06 486 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 PUS3Q9BZE2 481 aaKnown RBP26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 GLT8D2Q9H1C3 349 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 ATF7P17544 494 aaPredicted RBP26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 PPP1R13BQ96KQ4 1090 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 AFG3L2Q9Y4W6 797 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 FRMD3A2A2Y4 597 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 H0YIN7 160 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 PDE6AP16499 860 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 TSNAXIP1Q2TAA8 658 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 MFSD14BQ5SR56 506 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 GRAMD1CQ8IYS0 662 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 SSH3Q8TE77 659 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 HYOU1Q9Y4L1 999 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 DNMT1P26358 1616 aaKnown RBP26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 TCP10L2B9ZVM9 353 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 KCTD16Q68DU8 428 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 LSG1Q9H089 658 aaKnown RBP26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 STK24Q9Y6E0 443 aa26.34■■□□□ 1.81
RAPGEF1-203ENST00000372195 NACA2Q9H009 215 aa26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 RASSF7Q02833 373 aa26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 DLATP10515 647 aaKnown RBP26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 LIG3P49916 1009 aa26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 PDE1CQ14123 709 aaPredicted RBP26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 ARHGEF16Q5VV41 709 aa26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 PDE11AQ9HCR9 933 aa26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 PCDHA12Q9UN75 941 aa26.33■■□□□ 1.81
RAPGEF1-203ENST00000372195 TEX14Q8IWB6 1497 aa26.33■■□□□ 1.8
RAPGEF1-203ENST00000372195 PTGDRQ13258 359 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 KRT81Q14533 505 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 PPP2R5BQ15173 497 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 RASEFQ8IZ41 740 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 NT5C3AQ9H0P0 336 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 CMA1P23946 247 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 LMTK3Q96Q04 1460 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 GNA14O95837 355 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 RASGRP4Q8TDF6 673 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 CASP14P31944 242 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 PNMA1Q8ND90 353 aa26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 KDM5AP29375 1690 aaKnown RBP26.32■■□□□ 1.8
RAPGEF1-203ENST00000372195 TTC36A6NLP5 189 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 SARNPP82979 210 aaKnown RBP26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 BRD3Q15059 726 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 RNF10Q8N5U6 811 aaKnown RBP26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 SESN3P58005 492 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 KDM3AQ9Y4C1 1321 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 PGBD1Q96JS3 809 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 RAB20Q9NX57 234 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 IFRD2Q12894 506 aaPredicted RBP26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 NXNQ6DKJ4 435 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 C11orf57Q6ZUT1 292 aaPredicted RBP26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 PROSER3Q2NL68 480 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 DEPTORQ8TB45 409 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 CCDC51Q96ER9 411 aa26.31■■□□□ 1.8
RAPGEF1-203ENST00000372195 OR52Z1P0C646 297 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 MED10Q9BTT4 135 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 KLRF2D3W0D1 207 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 CASQ2O14958 399 aaPredicted RBP26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 ALAS1P13196 640 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 UBXN2AP68543 259 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 CYP4A11Q02928 519 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 ANKRD20A3Q5VUR7 823 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 ZNF589Q86UQ0 364 aaPredicted RBP26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 GLG1Q92896 1179 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 DKC1O60832 514 aaKnown RBP eCLIP26.3■■□□□ 1.82e-7■■■■■ 54.4
RAPGEF1-203ENST00000372195 SCG2P13521 617 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 SAT1P21673 171 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 CACNB1Q02641 598 aaPredicted RBP26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 ADCY1Q08828 1119 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 CAPS2Q9BXY5 557 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 RIPOR2Q9Y4F9 1068 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 GIPC1O14908 333 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 PAGR1Q9BTK6 254 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 NUF2Q9BZD4 464 aa26.3■■□□□ 1.8
RAPGEF1-203ENST00000372195 NLRX1Q86UT6 975 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 MED23Q9ULK4 1368 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 ARHGAP42A6NI28 874 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 RBL2Q08999 1139 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 MMS19Q96T76 1030 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 GREM2Q9H772 168 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 IVNS1ABPQ9Y6Y0 642 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms