RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TROVE2P10155 538 aaKnown RBP eCLIP15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 PLCB3Q01970 1234 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 NSMFQ6X4W1 530 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 CCDC42Q96M95 316 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 TRIM55Q9BYV6 548 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 KIF24Q5T7B8 1368 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 ASIC1P78348 528 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 CTDSPL2Q05D32 466 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 ARHGEF6Q15052 776 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 IMPG2Q9BZV3 1241 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 TAF12Q16514 161 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 NLRP7Q8WX94 980 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 MMP10P09238 476 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 KIFC2Q96AC6 838 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 SPC25Q9HBM1 224 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 SCHIP1Q9P0W5 487 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 ANKFY1Q9P2R3 1169 aa15.49■□□□□ 0.07
RAPGEF1-202ENST00000372190 BBOX1O75936 387 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 USH1GQ495M9 461 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 ICE2Q659A1 982 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 PLEKHM2Q8IWE5 1019 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 DTNBP1Q96EV8 351 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 TMEM87BQ96K49 555 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 RMDN2Q96LZ7 410 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 ARPP21Q9UBL0 812 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 SRP68Q9UHB9 627 aaKnown RBP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 LEMD3Q9Y2U8 911 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 SPATA31A6Q5VVP1 1343 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 CHMLP26374 656 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 BCAMP50895 628 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 GNGT1P63211 74 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 TTLL6Q8N841 843 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 JPH2Q9BR39 696 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 PIM2Q9P1W9 311 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 DYTNA2CJ06 578 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 ZBTB7AO95365 584 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 LMNAP02545 664 aaKnown RBP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 HNRNPCP07910 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 UAP1Q16222 522 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 FAM71BQ8TC56 605 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 INTS4Q96HW7 963 aaKnown RBP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 NAPGQ99747 312 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 KIAA2013Q8IYS2 634 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 GLT8D2Q9H1C3 349 aa15.48■□□□□ 0.07
RAPGEF1-202ENST00000372190 NPR1P16066 1061 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 RTKN2Q8IZC4 609 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 ABT1Q9ULW3 272 aaKnown RBP15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 BTDP43251 543 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 CFAP61Q8NHU2 1237 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 CSRNP2Q9H175 543 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 GREM2Q9H772 168 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 UTP11Q9Y3A2 253 aaKnown RBP15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 ATP6V0A2Q9Y487 856 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 IBTKQ9P2D0 1353 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 SDCCAG3Q96C92 435 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 A0A087WUV0 522 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 MARCKSP29966 332 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 AK2P54819 239 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 SEL1L2Q5TEA6 688 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 KBTBD3Q8NAB2 608 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 DBNDD1Q9H9R9 158 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 EN1Q05925 392 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 NEK11Q8NG66 645 aa15.47■□□□□ 0.07
RAPGEF1-202ENST00000372190 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 CLTCQ00610 1675 aaKnown RBP15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 GOLGA8KD6RF30 607 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 SPTLC2O15270 562 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 LETM2Q2VYF4 491 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 ZBTB41Q5SVQ8 909 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 NBPF10Q6P3W6 841 aaKnown RBP15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 SH3GL2Q99962 352 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 PNMA6EA0A0J9YXQ4 647 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 TAF11Q15544 211 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 CCDC89Q8N998 374 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 AZI2Q9H6S1 392 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 GAS8O95995 478 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 IRX1P78414 480 aaPredicted RBP15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 ARMC2Q8NEN0 867 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 RRAGDQ9NQL2 400 aaPredicted RBP15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 NDUFB9Q9Y6M9 179 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 OVOS2A0A0G2JMS6 1433 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 OVOS2A0A0J9YW53 1432 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
RAPGEF1-202ENST00000372190 EVI5O60447 810 aa15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 SKIP12755 728 aa15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 KCNA4P22459 653 aa15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 C16orf87Q6PH81 154 aa15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 DTHD1Q6ZMT9 781 aa15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 CEP70Q8NHQ1 597 aa15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 PSPC1Q8WXF1 523 aaKnown RBP15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 CEP19Q96LK0 163 aa15.46■□□□□ 0.06
RAPGEF1-202ENST00000372190 KRT3P12035 628 aa15.45■□□□□ 0.06
RAPGEF1-202ENST00000372190 PPANQ9NQ55 473 aaKnown RBP15.45■□□□□ 0.06
RAPGEF1-202ENST00000372190 M0QZ92 97 aa15.45■□□□□ 0.06
RAPGEF1-202ENST00000372190 PAK2Q13177 524 aa15.45■□□□□ 0.06
RAPGEF1-202ENST00000372190 FLOT2Q14254 428 aa15.45■□□□□ 0.06
RAPGEF1-202ENST00000372190 E2F4Q16254 413 aa15.45■□□□□ 0.06
RAPGEF1-202ENST00000372190 ST13P4Q8IZP2 240 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms