RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 SWAP70Q9UH65 585 aa22.58■■□□□ 1.21
LHX3-202ENST00000371748 IKBKBO14920 756 aa22.58■■□□□ 1.21
LHX3-202ENST00000371748 LMOD1P29536 600 aaPredicted RBP22.58■■□□□ 1.21
LHX3-202ENST00000371748 TPM4P67936 248 aa22.58■■□□□ 1.21
LHX3-202ENST00000371748 KANK3Q6NY19 840 aa22.58■■□□□ 1.21
LHX3-202ENST00000371748 DAGLBQ8NCG7 672 aa22.58■■□□□ 1.21
LHX3-202ENST00000371748 SMARCE1Q969G3 411 aa22.58■■□□□ 1.21
LHX3-202ENST00000371748 PIGSQ96S52 555 aa22.58■■□□□ 1.21
LHX3-202ENST00000371748 PDGFDQ9GZP0 370 aaPredicted RBP22.58■■□□□ 1.21
LHX3-202ENST00000371748 IGKV6D-41A0A0C4DH26 115 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 HLA-DOAP06340 250 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 NAPAP54920 295 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 TCP10Q12799 353 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 PPP4R3BQ5MIZ7 849 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 C7orf43Q8WVR3 580 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 RRP36Q96EU6 259 aaKnown RBP22.57■■□□□ 1.2
LHX3-202ENST00000371748 HSD3B7Q9H2F3 369 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 CTIFO43310 598 aaKnown RBP22.57■■□□□ 1.2
LHX3-202ENST00000371748 ZSCAN20P17040 1043 aaPredicted RBP22.57■■□□□ 1.2
LHX3-202ENST00000371748 SARSP49591 514 aaKnown RBP22.57■■□□□ 1.2
LHX3-202ENST00000371748 INF2Q27J81 1249 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 NT5DC1Q5TFE4 455 aa22.57■■□□□ 1.2
LHX3-202ENST00000371748 SMC2O95347 1197 aa22.56■■□□□ 1.2
LHX3-202ENST00000371748 AFMP43652 599 aa22.56■■□□□ 1.2
LHX3-202ENST00000371748 CACTINQ8WUQ7 758 aaKnown RBP22.56■■□□□ 1.2
LHX3-202ENST00000371748 XPO4Q9C0E2 1151 aaKnown RBP22.56■■□□□ 1.2
LHX3-202ENST00000371748 IFNKQ9P0W0 207 aa22.56■■□□□ 1.2
LHX3-202ENST00000371748 SEC63Q9UGP8 760 aaKnown RBP22.56■■□□□ 1.2
LHX3-202ENST00000371748 MYL5Q02045 173 aa22.56■■□□□ 1.2
LHX3-202ENST00000371748 GALNT17Q6IS24 598 aa22.56■■□□□ 1.2
LHX3-202ENST00000371748 C4orf32Q8N8J7 132 aa22.56■■□□□ 1.2
LHX3-202ENST00000371748 MPHOSPH10O00566 681 aaKnown RBP22.55■■□□□ 1.2
LHX3-202ENST00000371748 ATP1A3P13637 1013 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 ARID5BQ14865 1188 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 FILIP1Q7Z7B0 1213 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 ANKRD7Q92527 254 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 ZMYND12Q9H0C1 365 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 MYH4Q9Y623 1939 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 SIPA1L1O43166 1804 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 TTLL1O95922 423 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 SLFN14P0C7P3 912 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 CASP1P29466 404 aa22.55■■□□□ 1.2
LHX3-202ENST00000371748 FKBP1AP62942 108 aaKnown RBP22.55■■□□□ 1.2
LHX3-202ENST00000371748 SMCO2A6NFE2 343 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 FAM196BA6NMK8 535 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 MORC3Q14149 939 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 PAGE5Q96GU1 130 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 DNAJC18Q9H819 358 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 MYO3BQ8WXR4 1341 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 C21orf2O43822 256 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 SMARCA1P28370 1054 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 CBX1P83916 185 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 ATP2B2Q01814 1243 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 CCDC12Q8WUD4 166 aaPredicted RBP22.54■■□□□ 1.2
LHX3-202ENST00000371748 RIOX1Q9H6W3 641 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 GPCPD1Q9NPB8 672 aa22.54■■□□□ 1.2
LHX3-202ENST00000371748 GREB1LQ9C091 1923 aaPredicted RBP22.53■■□□□ 1.2
LHX3-202ENST00000371748 DDTLA6NHG4 134 aaPredicted RBP22.53■■□□□ 1.2
LHX3-202ENST00000371748 SH3RF1Q7Z6J0 888 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 PDCL2Q8N4E4 241 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 SPATA20Q8TB22 786 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 MRIQ9BWK5 157 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 FAM198AQ9UFP1 575 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 FANCCQ00597 558 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 DMTNQ08495 405 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 ASPRV1Q53RT3 343 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 ARL6IP4Q66PJ3 421 aaKnown RBP22.53■■□□□ 1.2
LHX3-202ENST00000371748 STAMQ92783 540 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 TMEM60Q9H2L4 133 aa22.53■■□□□ 1.2
LHX3-202ENST00000371748 SNHG28P0DPA3 235 aa22.52■■□□□ 1.2
LHX3-202ENST00000371748 CDC25AP30304 524 aa22.52■■□□□ 1.2
LHX3-202ENST00000371748 CCDC34Q96HJ3 373 aa22.52■■□□□ 1.2
LHX3-202ENST00000371748 C6orf50Q9HD87 102 aa22.52■■□□□ 1.2
LHX3-202ENST00000371748 SOGA3Q5TF21 947 aa22.52■■□□□ 1.19
LHX3-202ENST00000371748 LRRC8AQ8IWT6 810 aa22.52■■□□□ 1.19
LHX3-202ENST00000371748 ZSCAN29Q8IWY8 852 aaPredicted RBP22.52■■□□□ 1.19
LHX3-202ENST00000371748 TRIML1Q8N9V2 468 aa22.52■■□□□ 1.19
LHX3-202ENST00000371748 EHD4Q9H223 541 aa22.52■■□□□ 1.19
LHX3-202ENST00000371748 FANCLQ9NW38 375 aa22.52■■□□□ 1.19
LHX3-202ENST00000371748 PPIP5K2O43314 1243 aa22.51■■□□□ 1.19
LHX3-202ENST00000371748 HDLBPQ00341 1268 aaKnown RBP22.51■■□□□ 1.19
LHX3-202ENST00000371748 E2F4Q16254 413 aa22.51■■□□□ 1.19
LHX3-202ENST00000371748 SHROOM1Q2M3G4 852 aaPredicted RBP22.51■■□□□ 1.19
LHX3-202ENST00000371748 UTP14CQ5TAP6 766 aaKnown RBP22.51■■□□□ 1.19
LHX3-202ENST00000371748 FAM177A1Q8N128 213 aaPredicted RBP22.51■■□□□ 1.19
LHX3-202ENST00000371748 YDJCA8MPS7 323 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 GNA11P29992 359 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.19
LHX3-202ENST00000371748 SH3BP5LQ7L8J4 393 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 MLKLQ8NB16 471 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 IDI2Q9BXS1 227 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 LONP1P36776 959 aaKnown RBP22.5■■□□□ 1.19
LHX3-202ENST00000371748 IQUBQ8NA54 791 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 COA7Q96BR5 231 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 SERPINA10Q9UK55 444 aa22.5■■□□□ 1.19
LHX3-202ENST00000371748 ZNF543Q08ER8 600 aa22.49■■□□□ 1.19
LHX3-202ENST00000371748 DPYDQ12882 1025 aa22.49■■□□□ 1.19
LHX3-202ENST00000371748 HSP90AA4PQ58FG1 418 aa22.49■■□□□ 1.19
LHX3-202ENST00000371748 TTBK2Q6IQ55 1244 aa22.49■■□□□ 1.19
LHX3-202ENST00000371748 KRT25Q7Z3Z0 450 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms