RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ZSCAN12O43309 604 aa32.76■■■□□ 2.84
SSBP3-204ENST00000371320 ADKP55263 362 aaKnown RBP32.76■■■□□ 2.84
SSBP3-204ENST00000371320 DDR1Q08345 913 aa32.76■■■□□ 2.84
SSBP3-204ENST00000371320 INF2Q27J81 1249 aa32.76■■■□□ 2.84
SSBP3-204ENST00000371320 PPP4R3BQ5MIZ7 849 aa32.76■■■□□ 2.84
SSBP3-204ENST00000371320 APTXQ7Z2E3 356 aaKnown RBP32.76■■■□□ 2.84
SSBP3-204ENST00000371320 STX10O60499 249 aa32.76■■■□□ 2.83
SSBP3-204ENST00000371320 PARP1P09874 1014 aaKnown RBP32.76■■■□□ 2.83
SSBP3-204ENST00000371320 CDC25AP30304 524 aa32.76■■■□□ 2.83
SSBP3-204ENST00000371320 CTAGE1Q96RT6 745 aa32.76■■■□□ 2.83
SSBP3-204ENST00000371320 CTNND2Q9UQB3 1225 aa32.76■■■□□ 2.83
SSBP3-204ENST00000371320 GAKO14976 1311 aa32.76■■■□□ 2.83
SSBP3-204ENST00000371320 ETF1P62495 437 aaKnown RBP32.75■■■□□ 2.83
SSBP3-204ENST00000371320 RRAGBQ5VZM2 374 aa32.75■■■□□ 2.83
SSBP3-204ENST00000371320 SLU7O95391 586 aaKnown RBP32.74■■■□□ 2.83
SSBP3-204ENST00000371320 STAT6P42226 847 aa32.74■■■□□ 2.83
SSBP3-204ENST00000371320 ERO1AQ96HE7 468 aa32.74■■■□□ 2.83
SSBP3-204ENST00000371320 RMND1Q9NWS8 449 aa32.74■■■□□ 2.83
SSBP3-204ENST00000371320 KARSQ15046 597 aaKnown RBP32.74■■■□□ 2.83
SSBP3-204ENST00000371320 RASGRP2Q7LDG7 609 aa32.74■■■□□ 2.83
SSBP3-204ENST00000371320 REXO1L1PQ8IX06 675 aa32.74■■■□□ 2.83
SSBP3-204ENST00000371320 POLRMTO00411 1230 aaKnown RBP32.73■■■□□ 2.83
SSBP3-204ENST00000371320 TEX33O43247 280 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 CCDC12Q8WUD4 166 aaPredicted RBP32.73■■■□□ 2.83
SSBP3-204ENST00000371320 TMEM60Q9H2L4 133 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 CPVLQ9H3G5 476 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 NAPAP54920 295 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 CEP95Q96GE4 821 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 L2HGDHQ9H9P8 463 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 DISC1Q9NRI5 854 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 ADD3Q9UEY8 706 aaKnown RBP32.73■■■□□ 2.83
SSBP3-204ENST00000371320 PPP2R2CQ9Y2T4 447 aa32.73■■■□□ 2.83
SSBP3-204ENST00000371320 CDK5RAP2Q96SN8 1893 aa32.72■■■□□ 2.83
SSBP3-204ENST00000371320 RPN1P04843 607 aaKnown RBP32.72■■■□□ 2.83
SSBP3-204ENST00000371320 FILIP1LQ4L180 1135 aa32.72■■■□□ 2.83
SSBP3-204ENST00000371320 USP17L2Q6R6M4 530 aa32.72■■■□□ 2.83
SSBP3-204ENST00000371320 ZMYND12Q9H0C1 365 aa32.72■■■□□ 2.83
SSBP3-204ENST00000371320 DDX60LQ5H9U9 1706 aaKnown RBP32.72■■■□□ 2.83
SSBP3-204ENST00000371320 KLRG2A4D1S0 409 aaPredicted RBP32.71■■■□□ 2.83
SSBP3-204ENST00000371320 LAD1O00515 517 aa32.71■■■□□ 2.83
SSBP3-204ENST00000371320 RASSF8Q8NHQ8 419 aa32.71■■■□□ 2.83
SSBP3-204ENST00000371320 RRP36Q96EU6 259 aaKnown RBP32.71■■■□□ 2.83
SSBP3-204ENST00000371320 RWDD2AQ9UIY3 292 aa32.71■■■□□ 2.83
SSBP3-204ENST00000371320 GTF2IP78347 998 aa32.71■■■□□ 2.83
SSBP3-204ENST00000371320 ZNF658Q5TYW1 1059 aaPredicted RBP32.71■■■□□ 2.83
SSBP3-204ENST00000371320 DNAI1Q9UI46 699 aa32.71■■■□□ 2.83
SSBP3-204ENST00000371320 PHLPP2Q6ZVD8 1323 aa32.7■■■□□ 2.83
SSBP3-204ENST00000371320 AKR1B15C9JRZ8 316 aaPredicted RBP32.7■■■□□ 2.83
SSBP3-204ENST00000371320 TRIM65Q6PJ69 517 aa32.7■■■□□ 2.83
SSBP3-204ENST00000371320 TMC4Q7Z404 712 aa32.7■■■□□ 2.83
SSBP3-204ENST00000371320 CGNQ9P2M7 1197 aaKnown RBP32.7■■■□□ 2.83
SSBP3-204ENST00000371320 DAGLAQ9Y4D2 1042 aa32.7■■■□□ 2.83
SSBP3-204ENST00000371320 PPEF1O14829 653 aaPredicted RBP32.7■■■□□ 2.82
SSBP3-204ENST00000371320 UBA7P41226 1012 aa32.7■■■□□ 2.82
SSBP3-204ENST00000371320 PPFIBP1Q86W92 1011 aa32.7■■■□□ 2.82
SSBP3-204ENST00000371320 SEC63Q9UGP8 760 aaKnown RBP32.7■■■□□ 2.82
SSBP3-204ENST00000371320 PAK1Q13153 545 aa32.69■■■□□ 2.82
SSBP3-204ENST00000371320 KRT25Q7Z3Z0 450 aa32.69■■■□□ 2.82
SSBP3-204ENST00000371320 SP8Q8IXZ3 490 aa32.69■■■□□ 2.82
SSBP3-204ENST00000371320 IGSF22Q8N9C0 903 aa32.69■■■□□ 2.82
SSBP3-204ENST00000371320 C6orf50Q9HD87 102 aa32.69■■■□□ 2.82
SSBP3-204ENST00000371320 PP2D1A8MPX8 630 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 COBLO75128 1261 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 SMARCA1P28370 1054 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 PRPHP41219 470 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 UBE2Q2Q8WVN8 375 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 SMCO2A6NFE2 343 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 RIMBP2O15034 1052 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 GNA11P29992 359 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 PBX1P40424 430 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 PANX2Q96RD6 677 aa32.68■■■□□ 2.82
SSBP3-204ENST00000371320 NOL12Q9UGY1 213 aaKnown RBP eCLIP32.68■■■□□ 2.82
SSBP3-204ENST00000371320 V9GYY5 206 aaPredicted RBP32.68■■■□□ 2.82
SSBP3-204ENST00000371320 GOLGA6L9A6NEM1 432 aa32.67■■■□□ 2.82
SSBP3-204ENST00000371320 CCDC93Q567U6 631 aa32.67■■■□□ 2.82
SSBP3-204ENST00000371320 NELFBQ8WX92 580 aa32.67■■■□□ 2.82
SSBP3-204ENST00000371320 VAT1LQ9HCJ6 419 aa32.67■■■□□ 2.82
SSBP3-204ENST00000371320 NOVP48745 357 aa32.66■■■□□ 2.82
SSBP3-204ENST00000371320 NONOQ15233 471 aaKnown RBP eCLIP32.66■■■□□ 2.821e-6■■■□□ 17.3
SSBP3-204ENST00000371320 NAALADL2Q58DX5 795 aa32.66■■■□□ 2.82
SSBP3-204ENST00000371320 SOGA3Q5TF21 947 aa32.66■■■□□ 2.82
SSBP3-204ENST00000371320 CCSER1Q9C0I3 900 aa32.66■■■□□ 2.82
SSBP3-204ENST00000371320 TOGARAM2Q6ZUX3 1019 aa32.66■■■□□ 2.82
SSBP3-204ENST00000371320 COA1Q9GZY4 146 aa32.66■■■□□ 2.82
SSBP3-204ENST00000371320 TRIM37O94972 964 aa32.65■■■□□ 2.82
SSBP3-204ENST00000371320 RBL2Q08999 1139 aa32.65■■■□□ 2.82
SSBP3-204ENST00000371320 PICALMQ13492 652 aa32.65■■■□□ 2.82
SSBP3-204ENST00000371320 LIMA1Q9UHB6 759 aaKnown RBP32.65■■■□□ 2.82
SSBP3-204ENST00000371320 USP17L5A8MUK1 530 aa32.65■■■□□ 2.82
SSBP3-204ENST00000371320 PIGSQ96S52 555 aa32.65■■■□□ 2.82
SSBP3-204ENST00000371320 QTRT2Q9H974 415 aaKnown RBP32.65■■■□□ 2.82
SSBP3-204ENST00000371320 GDAQ9Y2T3 454 aa32.65■■■□□ 2.82
SSBP3-204ENST00000371320 ATP6V0A2Q9Y487 856 aa32.65■■■□□ 2.82
SSBP3-204ENST00000371320 MYH1P12882 1939 aa32.64■■■□□ 2.82
SSBP3-204ENST00000371320 SPAG1Q07617 926 aa32.64■■■□□ 2.82
SSBP3-204ENST00000371320 KRT31Q15323 416 aa32.64■■■□□ 2.82
SSBP3-204ENST00000371320 LETM2Q2VYF4 491 aa32.64■■■□□ 2.82
SSBP3-204ENST00000371320 CCNT1O60563 726 aaKnown RBP32.63■■■□□ 2.81
SSBP3-204ENST00000371320 SUGT1Q9Y2Z0 365 aa32.63■■■□□ 2.81
SSBP3-204ENST00000371320 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms