RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, humanhuman

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-204ENST00000371219 ERVK-9P63128 1117 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 ERVK-24P63145 666 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
RBM38-204ENST00000371219 KIF22Q14807 665 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 APOA5Q6Q788 366 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 SYNE3Q6ZMZ3 975 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 KCTD1Q719H9 257 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 SLC38A10Q9HBR0 1119 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
RBM38-204ENST00000371219 BAZ2BQ9UIF8 2168 aaKnown RBP17.21■□□□□ 0.34
RBM38-204ENST00000371219 ZNFX1Q9P2E3 1918 aaKnown RBP17.2■□□□□ 0.34
RBM38-204ENST00000371219 ZSWIM8A7E2V4 1837 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
RBM38-204ENST00000371219 SMARCA1P28370 1054 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
RBM38-204ENST00000371219 COL9A3Q14050 684 aaPredicted RBP17.2■□□□□ 0.34
RBM38-204ENST00000371219 ANKRD1Q15327 319 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 ANKRD13CQ8N6S4 541 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 SHCBP1Q8NEM2 672 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
RBM38-204ENST00000371219 ZNF296Q8WUU4 475 aaPredicted RBP17.2■□□□□ 0.34
RBM38-204ENST00000371219 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 R3HDMLQ9H3Y0 253 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 CPA4Q9UI42 421 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 HTTP42858 3142 aa17.2■□□□□ 0.34
RBM38-204ENST00000371219 ZBED4O75132 1171 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 MAPK4P31152 587 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 Q6ZUG5 572 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 REPS2Q8NFH8 660 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 TEX13BQ9BXU2 312 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 LRRC2Q9BYS8 371 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 RANBP17Q9H2T7 1088 aaKnown RBP17.19■□□□□ 0.34
RBM38-204ENST00000371219 SENP2Q9HC62 589 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 RBM28Q9NW13 759 aaKnown RBP17.19■□□□□ 0.34
RBM38-204ENST00000371219 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 MAD2L2Q9UI95 211 aa17.19■□□□□ 0.34
RBM38-204ENST00000371219 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
RBM38-204ENST00000371219 PLXNA1Q9UIW2 1896 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 ZBTB43O43298 467 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 CNMDO75829 334 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 SLC25A27O95847 323 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.18■□□□□ 0.344e-7■■■■■ 50.1
RBM38-204ENST00000371219 RASGRP2Q7LDG7 609 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 KIFC2Q96AC6 838 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
RBM38-204ENST00000371219 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 TXNRD2Q9NNW7 524 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 PDRG1Q9NUG6 133 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 ZNF214Q9UL59 606 aaPredicted RBP17.18■□□□□ 0.34
RBM38-204ENST00000371219 PRR12Q9ULL5 1215 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
RBM38-204ENST00000371219 CTDP1Q9Y5B0 961 aaPredicted RBP17.18■□□□□ 0.34
RBM38-204ENST00000371219 FRMPD2Q68DX3 1309 aaPredicted RBP17.18■□□□□ 0.34
RBM38-204ENST00000371219 CCDC196A0A1B0GTZ2 297 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 SMCHD1A6NHR9 2005 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 LBX1P52954 281 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 PRMT2P55345 433 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 FCGRTP55899 365 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 POTEEQ6S8J3 1075 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 RIOX2Q8IUF8 465 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 BRF1Q92994 677 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 PAGR1Q9BTK6 254 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 MROH8Q9H579 483 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 GPHNQ9NQX3 736 aaPredicted RBP17.17■□□□□ 0.34
RBM38-204ENST00000371219 BTBD7Q9P203 1132 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
RBM38-204ENST00000371219 KLF18A0A0U1RQI7 1052 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 KLRF2D3W0D1 207 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 CPA1P15085 419 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 TRAF1Q13077 416 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
RBM38-204ENST00000371219 RABEP1Q15276 862 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 TKFCQ3LXA3 575 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 FANCBQ8NB91 859 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
RBM38-204ENST00000371219 MAF1Q9H063 256 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 GPCPD1Q9NPB8 672 aa17.16■□□□□ 0.34
RBM38-204ENST00000371219 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 ICAM1P05362 532 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 ABRAQ8N0Z2 381 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 NUP133Q8WUM0 1156 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 SOCS4Q8WXH5 440 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 MTMR8Q96EF0 704 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 KIF2CQ99661 725 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 RIOX1Q9H6W3 641 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 FBXO40Q9UH90 709 aa17.15■□□□□ 0.34
RBM38-204ENST00000371219 STRNO43815 780 aa17.14■□□□□ 0.33
RBM38-204ENST00000371219 GOLGA8HP0CJ92 632 aa17.14■□□□□ 0.33
RBM38-204ENST00000371219 HOXD10P28358 340 aa17.14■□□□□ 0.33
RBM38-204ENST00000371219 STAT3P40763 770 aa17.14■□□□□ 0.33
RBM38-204ENST00000371219 METAP2P50579 478 aaKnown RBP eCLIP17.14■□□□□ 0.331e-6■■■□□ 15.4
RBM38-204ENST00000371219 PKN2Q16513 984 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms