RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 DYNLL1P63167 89 aaKnown RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 GKAP1Q5VSY0 366 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 PEX26Q7Z412 305 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 MCF2L2Q86YR7 1114 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 C17orf53Q8N3J3 647 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 IL17REQ8NFR9 667 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 EEF2KMTQ96G04 330 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 GOLGA6AQ9NYA3 693 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 KIAA0232Q92628 1395 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 PBRM1Q86U86 1689 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 RNASELQ05823 741 aaKnown RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 TRIM14Q14142 442 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 FYB2Q5VWT5 728 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 NLGN1Q8N2Q7 840 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 CBX8Q9HC52 389 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 NFE2L3Q9Y4A8 694 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 SETD1BQ9UPS6 1966 aaKnown RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 TNKSO95271 1327 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 KDM3AQ9Y4C1 1321 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 CIB2O75838 187 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 HOXB7P09629 217 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 ATF7P17544 494 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 PTH1RQ03431 593 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 HAUS2Q9NVX0 235 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 MAP3K15Q6ZN16 1313 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 PRAMEF22A3QJZ6 481 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 IGSF3O75054 1194 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 AP5M1Q9H0R1 490 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 TACC3Q9Y6A5 838 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 IFNB1P01574 187 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 XRCC5P13010 732 aaKnown RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 ATP5DP30049 168 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 VPS41P49754 854 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 ADKP55263 362 aaKnown RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 ME3Q16798 604 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 TTC30AQ86WT1 665 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 TMOD1P28289 359 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 NAA25Q14CX7 972 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 FAM184BQ9ULE4 1060 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 TMEM191BP0C7N4 346 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 MAGEA1P43355 309 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 LONRF2Q1L5Z9 754 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 SRP68Q9UHB9 627 aaKnown RBP9.42□□□□□ -0.9
ABCA4-201ENST00000370225 MLH3Q9UHC1 1453 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 BUB1O43683 1085 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 ATP5JP18859 108 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
ABCA4-201ENST00000370225 NBPF11Q86T75 865 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 GABPB2Q8TAK5 448 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-201ENST00000370225 NUP58Q9BVL2 599 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 NOL3O60936 208 aaKnown RBP9.42□□□□□ -0.9
ABCA4-201ENST00000370225 KRT15P19012 456 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 PROSER3Q2NL68 480 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 FAM160B1Q5W0V3 765 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 SDCCAG8Q86SQ7 713 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-201ENST00000370225 CTAGE3PQ8IX95 158 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 DSCC1Q9BVC3 393 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 ZKSCAN5Q9Y2L8 839 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 PCDHA1Q9Y5I3 950 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 XDHP47989 1333 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 TMEM94Q12767 1356 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 YWHAEP62258 255 aaKnown RBP9.42□□□□□ -0.9
ABCA4-201ENST00000370225 ARMCX5Q6P1M9 558 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 HDXQ7Z353 690 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 FAM178BQ8IXR5 827 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 SLFN12Q8IYM2 578 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 STMN2Q93045 179 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 ZFYVE16Q7Z3T8 1539 aa9.42□□□□□ -0.9
ABCA4-201ENST00000370225 MARK3P27448 753 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 DCLK2Q8N568 766 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 PRPF31Q8WWY3 499 aaKnown RBP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 GDAP1L1Q96MZ0 367 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 CLIC6Q96NY7 704 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 OSTNP61366 133 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 CACNB1Q02641 598 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 HHATQ5VTY9 493 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 ARMC9Q7Z3E5 817 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 PPM1KQ8N3J5 372 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 NLRP7Q8WX94 980 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 ZBTB1Q9Y2K1 713 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 KDM5AP29375 1690 aaKnown RBP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 PLCB4Q15147 1175 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 PPP2R5AQ15172 486 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 MYOCDQ8IZQ8 938 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 RASGRP4Q8TDF6 673 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 RBSNQ9H1K0 784 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 C1orf112Q9NSG2 853 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 NUB1Q9Y5A7 615 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 TTC36A6NLP5 189 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 STK25O00506 426 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 TLR3O15455 904 aaKnown RBP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 DALRD3Q5D0E6 543 aaKnown RBP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 RAB20Q9NX57 234 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms