RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 KRT26Q7Z3Y9 468 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 JADE2Q9NQC1 790 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 LUC7L2Q9Y383 392 aaKnown RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 CAMTA2O94983 1202 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 NDUFA10O95299 355 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 CASP8Q14790 479 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 ENOX2Q16206 610 aaKnown RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 E2F4Q16254 413 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 HSP90B2PQ58FF3 399 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 TMTC1Q8IUR5 882 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 ANKRD13CQ8N6S4 541 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 MMS19Q96T76 1030 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 SMARCAL1Q9NZC9 954 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 REXO2Q9Y3B8 237 aaKnown RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 SPEF2Q9C093 1822 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 LRRIQ3A6PVS8 624 aaPredicted RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 NTSR2O95665 410 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 HDXQ7Z353 690 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 AK7Q96M32 723 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 MKNK2Q9HBH9 465 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 TMEM51Q9NW97 253 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 MINPP1Q9UNW1 487 aa12.25□□□□□ -0.45
LRIF1-201ENST00000369763 TTF2Q9UNY4 1162 aaKnown RBP12.25□□□□□ -0.45
LRIF1-201ENST00000369763 LAMB4A4D0S4 1761 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 ZPR1O75312 459 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 CXCR5P32302 372 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 TXLNBQ8N3L3 684 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 LACRTQ9GZZ8 138 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 POLD4Q9HCU8 107 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 RCCD1A6NED2 376 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 GTPBP6O43824 516 aaPredicted RBP12.24□□□□□ -0.45
LRIF1-201ENST00000369763 ERLIN1O75477 346 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 PLEKP08567 350 aaPredicted RBP12.24□□□□□ -0.45
LRIF1-201ENST00000369763 FCER1AP12319 257 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 USP5P45974 858 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 DTHD1Q6ZMT9 781 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.24□□□□□ -0.45
LRIF1-201ENST00000369763 IRF2BP1Q8IU81 584 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 TNFRSF25Q93038 417 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 NAA15Q9BXJ9 866 aaKnown RBP12.24□□□□□ -0.45
LRIF1-201ENST00000369763 MAGEC2Q9UBF1 373 aaPredicted RBP12.24□□□□□ -0.45
LRIF1-201ENST00000369763 BRD3Q15059 726 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 ZNF658Q5TYW1 1059 aaPredicted RBP12.24□□□□□ -0.45
LRIF1-201ENST00000369763 DZIP1Q86YF9 867 aaKnown RBP12.24□□□□□ -0.45
LRIF1-201ENST00000369763 BLIDQ8IZY5 108 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 CSGALNACT2Q8N6G5 542 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 RWDD2AQ9UIY3 292 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 ADAMTSL3P82987 1691 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 UTRNP46939 3433 aa12.24□□□□□ -0.45
LRIF1-201ENST00000369763 MYH2Q9UKX2 1941 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 DNAJC21Q5F1R6 531 aaKnown RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 LRRC15Q8TF66 581 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 NSUN4Q96CB9 384 aaKnown RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 BCL9O00512 1426 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 ASIC1P78348 528 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 OR8K1Q8NGG5 319 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 FAM207AQ9NSI2 230 aaPredicted RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 RSPH14Q9UHP6 348 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 L1RE1Q9UN81 338 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 SLIT2O94813 1529 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 MYH7P12883 1935 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 DDB1Q16531 1140 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 TTC19Q6DKK2 380 aaPredicted RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 DYMQ7RTS9 669 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 CRNKL1Q9BZJ0 848 aaKnown RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 DISC1Q9NRI5 854 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
LRIF1-201ENST00000369763 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
LRIF1-201ENST00000369763 COL1A1P02452 1464 aaPredicted RBP12.22□□□□□ -0.45
LRIF1-201ENST00000369763 CCNT1O60563 726 aaKnown RBP12.22□□□□□ -0.45
LRIF1-201ENST00000369763 TECP42680 631 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 C2orf54Q08AI8 447 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 NAALADL2Q58DX5 795 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 LEKR1Q6ZMV7 388 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 ELOA2Q8IYF1 753 aaPredicted RBP12.22□□□□□ -0.45
LRIF1-201ENST00000369763 MB21D1Q8N884 522 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 LIMA1Q9UHB6 759 aaKnown RBP12.22□□□□□ -0.45
LRIF1-201ENST00000369763 PDE4DQ08499 809 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
LRIF1-201ENST00000369763 MAPKAPK5Q8IW41 473 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 GJA10Q969M2 543 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 FAM204AQ9H8W3 233 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 KANSL2Q9H9L4 492 aa12.22□□□□□ -0.45
LRIF1-201ENST00000369763 RAD21O60216 631 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 EIF6P56537 245 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms