RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FRMPD2Q68DX3 1309 aaPredicted RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 MRC1P22897 1456 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 DKC1O60832 514 aaKnown RBP eCLIP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 SLU7O95391 586 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 PTPREP23469 700 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 CDC27P30260 824 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 SPATA1Q5VX52 437 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 DCAF15Q66K64 600 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 FBXL16Q8N461 479 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 NELFBQ8WX92 580 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 PGBD1Q96JS3 809 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 NOC4LQ9BVI4 516 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 OGFRQ9NZT2 677 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 ANAPC4Q9UJX5 808 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 MRPL11Q9Y3B7 192 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 FAM208AQ9UK61 1670 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 H7C1D1 291 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 TRAF5O00463 557 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 POLR3GO15318 223 aaPredicted RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 ZBED4O75132 1171 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 CKAP4Q07065 602 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 PDE4CQ08493 712 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 C12orf60Q5U649 245 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 CCDC174Q6PII3 467 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 CCDC84Q86UT8 332 aaPredicted RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 TMTC1Q8IUR5 882 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 TTLL6Q8N841 843 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 TBC1D5Q92609 795 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 TMOD4Q9NZQ9 345 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 PCDHA12Q9UN75 941 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 PCDHA1Q9Y5I3 950 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 GJA3Q9Y6H8 435 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 PDS5AQ29RF7 1337 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 CETN3O15182 167 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 PLEKHA8P1O95397 391 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CHGBP05060 677 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 KIF5AQ12840 1032 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 ORC2Q13416 577 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 GRM4Q14833 912 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 WDR78Q5VTH9 848 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 RESP18Q5W5W9 173 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 NEDD1Q8NHV4 660 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CSRNP1Q96S65 589 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 ATP6V0A2Q9Y487 856 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 PARP4Q9UKK3 1724 aaKnown RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CTAGE9A4FU28 777 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TACC1O75410 805 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CYP2D6P10635 497 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 GTF2F1P35269 517 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CETN2P41208 172 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 ANTXR2P58335 489 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TUBB2AQ13885 445 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CYP26C1Q6V0L0 522 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 LEKR1Q6ZMV7 388 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 LRP10Q7Z4F1 713 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TBC1D16Q8TBP0 767 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TMEM47Q9BQJ4 181 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TUBB2BQ9BVA1 445 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 VPS16Q9H269 839 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 AS3MTQ9HBK9 375 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 INCENPQ9NQS7 918 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 PCDHB6Q9Y5E3 794 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 RPN1P04843 607 aaKnown RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TECP42680 631 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CRKP46108 304 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 DPCR1Q3MIW9 517 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 USH1GQ495M9 461 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 HERC4Q5GLZ8 1057 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 NCAPH2Q6IBW4 605 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TMEM179Q6ZVK1 233 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 FMR1NBQ8N0W7 255 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 CEP112Q8N8E3 955 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 GPR101Q96P66 508 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 AGXT2Q9BYV1 514 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 DNAI2Q9GZS0 605 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 BLZF1Q9H2G9 400 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 EPB41L4AQ9HCS5 686 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 DDX25Q9UHL0 483 aaKnown RBP5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 TAF6LQ9Y6J9 622 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 RGPD1P0DJD0 1748 aa5.94□□□□□ -1.46
SMNDC1-202ENST00000369603 PNMA6FA0A0J9YX94 578 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 TCP10L2B9ZVM9 353 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 CALUO43852 315 aaPredicted RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 CFBP00751 764 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 TUBBP07437 444 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 DMTNQ08495 405 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 BMS1Q14692 1282 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 VWA3BQ502W6 1294 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 SARM1Q6SZW1 724 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 FNBP4Q8N3X1 1017 aaPredicted RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 STAMQ92783 540 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 PDLIM2Q96JY6 352 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 PIGSQ96S52 555 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 TSGA10Q9BZW7 698 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 FANCLQ9NW38 375 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 STK17AQ9UEE5 414 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 GOLGA6L10A6NI86 522 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 TMEM232C9JQI7 657 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 GCOM1H8Y6P7 765 aaPredicted RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 GNA14O95837 355 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms