RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.27■■□□□ 1.48
SMNDC1-201ENST00000369592 DEFB118Q96PH6 123 aa24.27■■□□□ 1.48
SMNDC1-201ENST00000369592 RNF41Q9H4P4 317 aaPredicted RBP24.27■■□□□ 1.48
SMNDC1-201ENST00000369592 PRKAR2AP13861 404 aaKnown RBP24.26■■□□□ 1.47
SMNDC1-201ENST00000369592 PLS1Q14651 629 aa24.26■■□□□ 1.47
SMNDC1-201ENST00000369592 RRP12Q5JTH9 1297 aaKnown RBP24.26■■□□□ 1.47
SMNDC1-201ENST00000369592 TMEM47Q9BQJ4 181 aa24.26■■□□□ 1.47
SMNDC1-201ENST00000369592 HMX1Q9NP08 348 aaPredicted RBP24.26■■□□□ 1.47
SMNDC1-201ENST00000369592 PLXNA1Q9UIW2 1896 aa24.26■■□□□ 1.47
SMNDC1-201ENST00000369592 SGSM2O43147 1006 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 MCCP23508 829 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 COPB2P35606 906 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 SAMD1Q6SPF0 538 aaPredicted RBP24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 RASGRP2Q7LDG7 609 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 NCAPG2Q86XI2 1143 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 TTC14Q96N46 770 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 TEX13BQ9BXU2 312 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 CWC22Q9HCG8 908 aaKnown RBP24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 CTNNA3Q9UI47 895 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 RIPK3Q9Y572 518 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 TRIOBPQ9H2D6 2365 aa24.25■■□□□ 1.47
SMNDC1-201ENST00000369592 TOP1P11387 765 aaKnown RBP24.24■■□□□ 1.47
SMNDC1-201ENST00000369592 SLC1A4P43007 532 aa24.24■■□□□ 1.47
SMNDC1-201ENST00000369592 OLFML2BQ68BL8 750 aa24.24■■□□□ 1.47
SMNDC1-201ENST00000369592 TOMM22Q9NS69 142 aa24.24■■□□□ 1.47
SMNDC1-201ENST00000369592 SMCHD1A6NHR9 2005 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 TMEM232C9JQI7 657 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 FDX1P10109 184 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 MNX1P50219 401 aaPredicted RBP24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 OAZ1P54368 228 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 PTH1RQ03431 593 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 LHX8Q68G74 356 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 FAM160B2Q86V87 743 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 RUFY2Q8WXA3 655 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 ANKS1AQ92625 1134 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 ESR2Q92731 530 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 KIFC2Q96AC6 838 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 FRMPD3Q5JV73 1810 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 CEP290O15078 2479 aa24.23■■□□□ 1.47
SMNDC1-201ENST00000369592 ZNF536O15090 1300 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 ZBED4O75132 1171 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 FCER1AP12319 257 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 STAT2P52630 851 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 IMMTQ16891 758 aaKnown RBP24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 BTNL9Q6UXG8 535 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 SKAP1Q86WV1 359 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 CHURC1Q8WUH1 139 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 DCAF4Q8WV16 495 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 OGDHLQ9ULD0 1010 aa24.22■■□□□ 1.47
SMNDC1-201ENST00000369592 H0YGN5 161 aa24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 SNHG28P0DPA3 235 aa24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 CCND3P30281 292 aaPredicted RBP24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 SNRNP48Q6IEG0 339 aaKnown RBP24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 KCTD1Q719H9 257 aa24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 DPP9Q86TI2 863 aa24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 DGKHQ86XP1 1220 aa24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 TRPV1Q8NER1 839 aa24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 DIS3Q9Y2L1 958 aaKnown RBP24.21■■□□□ 1.47
SMNDC1-201ENST00000369592 DNAJC25-GNG10A0A024R161 153 aa24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 ZNF792Q3KQV3 632 aa24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 MFSD14CQ5VZR4 134 aa24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 PIAS4Q8N2W9 510 aaPredicted RBP24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 MAML3Q96JK9 1138 aa24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 MMP19Q99542 508 aa24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 RAVER2Q9HCJ3 691 aaKnown RBP24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 ZSWIM5Q9P217 1185 aa24.2■■□□□ 1.46
SMNDC1-201ENST00000369592 B4E1Z4 1266 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 KDM4AO75164 1064 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 FARP2O94887 1054 aaPredicted RBP24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 TFRCP02786 760 aaKnown RBP24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 PDHBP11177 359 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 CYBAP13498 195 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 CYP2C19P33261 490 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 ANKLE1Q8NAG6 615 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 PRR12Q9ULL5 1215 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 SZT2Q5T011 3432 aa24.19■■□□□ 1.46
SMNDC1-201ENST00000369592 ALPK3Q96L96 1907 aa24.18■■□□□ 1.46
SMNDC1-201ENST00000369592 CYP21A2P08686 494 aa24.18■■□□□ 1.46
SMNDC1-201ENST00000369592 BMP2KLQ5H9B9 411 aa24.18■■□□□ 1.46
SMNDC1-201ENST00000369592 TTBK2Q6IQ55 1244 aa24.18■■□□□ 1.46
SMNDC1-201ENST00000369592 CPXCR1Q8N123 301 aa24.18■■□□□ 1.46
SMNDC1-201ENST00000369592 MAP4K1Q92918 833 aa24.18■■□□□ 1.46
SMNDC1-201ENST00000369592 SLC5A4Q9NY91 659 aa24.18■■□□□ 1.46
SMNDC1-201ENST00000369592 PGK2P07205 417 aa24.17■■□□□ 1.46
SMNDC1-201ENST00000369592 CHRDL2Q6WN34 429 aa24.17■■□□□ 1.46
SMNDC1-201ENST00000369592 CHST13Q8NET6 341 aa24.17■■□□□ 1.46
SMNDC1-201ENST00000369592 ZKSCAN3Q9BRR0 538 aa24.17■■□□□ 1.46
SMNDC1-201ENST00000369592 TAF6LQ9Y6J9 622 aa24.17■■□□□ 1.46
SMNDC1-201ENST00000369592 ZNF543Q08ER8 600 aa24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 KCTD2Q14681 263 aa24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 CCDC178Q5BJE1 867 aa24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 ENAHQ8N8S7 591 aaPredicted RBP24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 CHMP4CQ96CF2 233 aa24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 ZSCAN10Q96SZ4 725 aaPredicted RBP24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 KRT23Q9C075 422 aa24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 RANBP17Q9H2T7 1088 aaKnown RBP24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 CNNM2Q9H8M5 875 aa24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 U3KPZ7 1027 aaPredicted RBP24.16■■□□□ 1.46
SMNDC1-201ENST00000369592 DLL1O00548 723 aa24.15■■□□□ 1.46
SMNDC1-201ENST00000369592 IQCA1Q86XH1 822 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms