RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 NACA2Q9H009 215 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 DDX20Q9UHI6 824 aaKnown RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 NCAPH2Q6IBW4 605 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 EPSTI1Q96J88 318 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 HYOU1Q9Y4L1 999 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 YTHDC2Q9H6S0 1430 aaKnown RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 PTCD1O75127 700 aaKnown RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 GFAPP14136 432 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 PHEXP78562 749 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 FLIIQ13045 1269 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 SOGA3Q5TF21 947 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 VSTM4Q8IW00 320 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 FUKQ8N0W3 1084 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 RIN2Q8WYP3 895 aaPredicted RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 WASF1Q92558 559 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 NUDCD1Q96RS6 583 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 HDAC6Q9UBN7 1215 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 ALDH1L1O75891 902 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 ATP5HO75947 161 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 GSPT1P15170 499 aaKnown RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 AACSQ86V21 672 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 CYFIP2Q96F07 1278 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 WDR24Q96S15 920 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 PHACTR1Q9C0D0 580 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 GCC2Q8IWJ2 1684 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 COQ9O75208 318 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 STX2P32856 288 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 CFAP61Q8NHU2 1237 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 ELAC2Q9BQ52 826 aaKnown RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 HINFPQ9BQA5 517 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 LZTS2Q9BRK4 669 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 ECT2Q9H8V3 914 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 CD2APQ9Y5K6 639 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 IKBKGQ9Y6K9 419 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 TBCAO75347 108 aaKnown RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 PYGBP11216 843 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 GRIK3Q13003 919 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 BIRC3Q13489 604 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 ZFYVE27Q5T4F4 411 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 DENND2CQ68D51 928 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 YTHDF3Q7Z739 585 aaKnown RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 NEK1Q96PY6 1258 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 TMCO1Q9UM00 188 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 PRELID1Q9Y255 219 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 CARD8Q9Y2G2 431 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 ARHGEF5Q12774 1597 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 CCDC169A6NNP5 214 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 MYL1P05976 194 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 MYBL1P10243 752 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 MSH2P43246 934 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 GUCY2DQ02846 1103 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 CBX3Q13185 183 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 EIF4A2Q14240 407 aaKnown RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 C11orf91Q3C1V1 193 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 POTEEQ6S8J3 1075 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 FAXDC2Q96IV6 333 aa11.44□□□□□ -0.58
PRDM1-201ENST00000369089 UTP11Q9Y3A2 253 aaKnown RBP11.44□□□□□ -0.58
PRDM1-201ENST00000369089 SPATA31E1Q6ZUB1 1445 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 ADCY3O60266 1144 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
PRDM1-201ENST00000369089 SCTRP47872 440 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 GOLGA8FQ08AF8 430 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 GOLGA8DPQ0D2H9 430 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 MPP3Q13368 585 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 ZC3H12AQ5D1E8 599 aaKnown RBP11.43□□□□□ -0.58
PRDM1-201ENST00000369089 MAGEC3Q8TD91 643 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 PPP4R3AQ6IN85 833 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 SEC16BQ96JE7 1060 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 ATP6V1G3Q96LB4 118 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 SUGCTQ9HAC7 445 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 DNAAF2Q9NVR5 837 aaKnown RBP11.43□□□□□ -0.58
PRDM1-201ENST00000369089 RABL2BQ9UNT1 228 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 MAGEA13PA6NCF6 341 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 MAP2K7O14733 419 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 STX17P56962 302 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 TBL3Q12788 808 aaKnown RBP11.43□□□□□ -0.58
PRDM1-201ENST00000369089 PTGISQ16647 500 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 KLHL7Q8IXQ5 586 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 TRMT2AQ8IZ69 625 aaKnown RBP11.43□□□□□ -0.58
PRDM1-201ENST00000369089 MGARPQ8TDB4 240 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 CNNM1Q9NRU3 951 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 SPATA7Q9P0W8 599 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
PRDM1-201ENST00000369089 SNX14Q9Y5W7 946 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 SBNO1A3KN83 1393 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
PRDM1-201ENST00000369089 ACTN4O43707 911 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 FGFR1OPO95684 399 aaKnown RBP11.42□□□□□ -0.58
PRDM1-201ENST00000369089 IFNAR2P48551 515 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 SCNN1BP51168 640 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 RRAGBQ5VZM2 374 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 ARMCX5Q6P1M9 558 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 KIAA2013Q8IYS2 634 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 ATL2Q8NHH9 583 aa11.42□□□□□ -0.58
PRDM1-201ENST00000369089 NOVA2Q9UNW9 492 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms