RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
TPM3-211ENST00000368531 PRPF38AQ8NAV1 312 aaKnown RBP16.21■□□□□ 0.19
TPM3-211ENST00000368531 CTCFLQ8NI51 663 aaPredicted RBP16.21■□□□□ 0.19
TPM3-211ENST00000368531 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
TPM3-211ENST00000368531 MAD2L2Q9UI95 211 aa16.21■□□□□ 0.19
TPM3-211ENST00000368531 PPP1R9AQ9ULJ8 1098 aa16.21■□□□□ 0.19
TPM3-211ENST00000368531 CTDP1Q9Y5B0 961 aaPredicted RBP16.21■□□□□ 0.19
TPM3-211ENST00000368531 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 KLRF2D3W0D1 207 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 TLR2O60603 784 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 HSPA1AP0DMV8 641 aaKnown RBP16.2■□□□□ 0.18
TPM3-211ENST00000368531 HSPA1BP0DMV9 641 aaKnown RBP16.2■□□□□ 0.18
TPM3-211ENST00000368531 CALM1P0DP23 149 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 CALM2P0DP24 149 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 CALM3P0DP25 149 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 SLC4A3P48751 1232 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 STK3Q13188 491 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 PLS1Q14651 629 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 RABEP1Q15276 862 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
TPM3-211ENST00000368531 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 PRR12Q9ULL5 1215 aa16.2■□□□□ 0.18
TPM3-211ENST00000368531 MYH6P13533 1939 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 PALM3A6NDB9 673 aaPredicted RBP16.19■□□□□ 0.18
TPM3-211ENST00000368531 KIF5BP33176 963 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 GCLCP48506 637 aaPredicted RBP16.19■□□□□ 0.18
TPM3-211ENST00000368531 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
TPM3-211ENST00000368531 RTN1Q16799 776 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 POTEEQ6S8J3 1075 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 CMTR1Q8N1G2 835 aaKnown RBP16.19■□□□□ 0.18
TPM3-211ENST00000368531 FBXL16Q8N461 479 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 CCDC82Q8N4S0 544 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 PIBF1Q8WXW3 757 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 TXNRD2Q9NNW7 524 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 SAGE1Q9NXZ1 904 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 RBPJLQ9UBG7 517 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 ADGRA2Q96PE1 1338 aa16.19■□□□□ 0.18
TPM3-211ENST00000368531 VWA5AO00534 786 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 FOXN1O15353 648 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 ZBED4O75132 1171 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 PLEKHA8P1O95397 391 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 PDIA3P30101 505 aaKnown RBP16.18■□□□□ 0.18
TPM3-211ENST00000368531 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.18
TPM3-211ENST00000368531 ANKRD1Q15327 319 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 CCDC174Q6PII3 467 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 C17orf99Q6UX52 265 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 ALDH8A1Q9H2A2 487 aaPredicted RBP16.18■□□□□ 0.18
TPM3-211ENST00000368531 BTBD7Q9P203 1132 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 TPCN1Q9ULQ1 816 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
TPM3-211ENST00000368531 MYPNQ86TC9 1320 aa16.18■□□□□ 0.18
TPM3-211ENST00000368531 GPR25O00155 361 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 PLA2G6O60733 806 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 CNMDO75829 334 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
TPM3-211ENST00000368531 Q3C1V9 767 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 BTNL9Q6UXG8 535 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 LBX2Q6XYB7 198 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 NBPF11Q86T75 865 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 ADGRF4Q8IZF3 695 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
TPM3-211ENST00000368531 RAVER2Q9HCJ3 691 aaKnown RBP16.17■□□□□ 0.18
TPM3-211ENST00000368531 HPS5Q9UPZ3 1129 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 ZSWIM8A7E2V4 1837 aa16.17■□□□□ 0.18
TPM3-211ENST00000368531 A0A0G2JMZ2 1700 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 BCRP11274 1271 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 CDC27P30260 824 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 GNAQP50148 359 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 ERVK-9P63128 1117 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 ERVK-24P63145 666 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 TMEM132BQ14DG7 1078 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 SRBD1Q8N5C6 995 aaKnown RBP16.16■□□□□ 0.18
TPM3-211ENST00000368531 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 GTF3C2Q8WUA4 911 aaPredicted RBP16.16■□□□□ 0.18
TPM3-211ENST00000368531 ZNF274Q96GC6 653 aaPredicted RBP16.16■□□□□ 0.18
TPM3-211ENST00000368531 CFHR5Q9BXR6 569 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 ADAMTS5Q9UNA0 930 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 MGAMO43451 1857 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
TPM3-211ENST00000368531 CASP8AP2Q9UKL3 1982 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 ST18O60284 1047 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 PPFIA3O75145 1194 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 LARGE1O95461 756 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 TAL1P17542 331 aaPredicted RBP16.15■□□□□ 0.18
TPM3-211ENST00000368531 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
TPM3-211ENST00000368531 EVCP57679 992 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 SP3Q02447 781 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 FAM110CQ1W6H9 321 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 SLC35G1Q2M3R5 365 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 WDR78Q5VTH9 848 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 HOMER1Q86YM7 354 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
TPM3-211ENST00000368531 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 NECAB1Q8N987 351 aa16.15■□□□□ 0.18
TPM3-211ENST00000368531 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms