RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NUDT12Q9BQG2 462 aa26.37■■□□□ 1.81
ECHDC1-203ENST00000368291 SLC38A10Q9HBR0 1119 aa26.37■■□□□ 1.81
ECHDC1-203ENST00000368291 COL9A3Q14050 684 aaPredicted RBP26.36■■□□□ 1.81
ECHDC1-203ENST00000368291 WDR78Q5VTH9 848 aa26.36■■□□□ 1.81
ECHDC1-203ENST00000368291 FAM160B2Q86V87 743 aa26.36■■□□□ 1.81
ECHDC1-203ENST00000368291 CHURC1Q8WUH1 139 aa26.36■■□□□ 1.81
ECHDC1-203ENST00000368291 BRCA2P51587 3418 aa26.36■■□□□ 1.81
ECHDC1-203ENST00000368291 CYP2B6P20813 491 aa26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 STAT3P40763 770 aa26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 GRB14Q14449 540 aa26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 TTBK2Q6IQ55 1244 aa26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 MB21D2Q8IYB1 491 aaPredicted RBP26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 UBAC1Q9BSL1 405 aa26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 ISY1Q9ULR0 285 aaKnown RBP26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 PLXNA1Q9UIW2 1896 aa26.35■■□□□ 1.81
ECHDC1-203ENST00000368291 ATP2A1O14983 1001 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 SOX10P56693 466 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 ANTXR2P58335 489 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 CCDC96Q2M329 555 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 BTNL9Q6UXG8 535 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 RALYLQ86SE5 291 aaKnown RBP26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 NCAPG2Q86XI2 1143 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 PNMA1Q8ND90 353 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 MROH8Q9H579 483 aa26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 FRMPD2Q68DX3 1309 aaPredicted RBP26.34■■□□□ 1.81
ECHDC1-203ENST00000368291 SLC15A5A6NIM6 579 aa26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 SLC25A27O95847 323 aa26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 XRCC5P13010 732 aaKnown RBP26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 ZNF543Q08ER8 600 aa26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 MAP2K5Q13163 448 aa26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 MTFR1Q15390 333 aa26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 CWC22Q9HCG8 908 aaKnown RBP26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 PRR12Q9ULL5 1215 aa26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 RIPK3Q9Y572 518 aa26.33■■□□□ 1.81
ECHDC1-203ENST00000368291 ZBED4O75132 1171 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 CHST3Q7LGC8 479 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 CPXCR1Q8N123 301 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 TRIB2Q92519 343 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 TEX13BQ9BXU2 312 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 KAT14Q9H8E8 782 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 RAVER2Q9HCJ3 691 aaKnown RBP26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 GPCPD1Q9NPB8 672 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 IVNS1ABPQ9Y6Y0 642 aa26.33■■□□□ 1.8
ECHDC1-203ENST00000368291 STRNO43815 780 aa26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 MYCP01106 439 aaPredicted RBP26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 FDX1P10109 184 aa26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 SLC16A2P36021 539 aa26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 RGS2P41220 211 aa26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 IKQ13123 557 aaPredicted RBP26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 IFIT1BQ5T764 474 aaKnown RBP26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 SENP2Q9HC62 589 aa26.32■■□□□ 1.8
ECHDC1-203ENST00000368291 ZNF536O15090 1300 aa26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 POTEFA5A3E0 1075 aa26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 INHAP05111 366 aa26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 ADORA2AP29274 412 aa26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 OAZ1P54368 228 aa26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 CCL14Q16627 93 aa26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 SNRNP48Q6IEG0 339 aaKnown RBP26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 APBA2Q99767 749 aa26.31■■□□□ 1.8
ECHDC1-203ENST00000368291 MYH6P13533 1939 aa26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 IFIT3O14879 490 aaKnown RBP26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 HOXC6P09630 235 aa26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 SNAP25P60880 206 aa26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 TRIM32Q13049 653 aa26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 ABRAQ8N0Z2 381 aa26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 NPLOC4Q8TAT6 608 aa26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 IGDCC4Q8TDY8 1250 aa26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 BIN2Q9UBW5 565 aaPredicted RBP26.3■■□□□ 1.8
ECHDC1-203ENST00000368291 COBLO75128 1261 aa26.29■■□□□ 1.8
ECHDC1-203ENST00000368291 GOLGA8HP0CJ92 632 aa26.29■■□□□ 1.8
ECHDC1-203ENST00000368291 SYDE2Q5VT97 1194 aa26.29■■□□□ 1.8
ECHDC1-203ENST00000368291 RASEFQ8IZ41 740 aa26.29■■□□□ 1.8
ECHDC1-203ENST00000368291 HMGCRP04035 888 aa26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 COPB2P35606 906 aa26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 UBXN2AP68543 259 aa26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 TSGA10IPQ3SY00 556 aa26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 GPATCH4Q5T3I0 446 aaKnown RBP26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 AGBL1Q96MI9 1066 aa26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 RANBP17Q9H2T7 1088 aaKnown RBP26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 FLRT1Q9NZU1 646 aa26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 CTDP1Q9Y5B0 961 aaPredicted RBP26.28■■□□□ 1.8
ECHDC1-203ENST00000368291 IGHA2P01877 340 aa26.27■■□□□ 1.8
ECHDC1-203ENST00000368291 FCER1AP12319 257 aa26.27■■□□□ 1.8
ECHDC1-203ENST00000368291 CCL5P13501 91 aa26.27■■□□□ 1.8
ECHDC1-203ENST00000368291 RGS19P49795 217 aa26.27■■□□□ 1.8
ECHDC1-203ENST00000368291 RNF20Q5VTR2 975 aa26.27■■□□□ 1.8
ECHDC1-203ENST00000368291 CPVLQ9H3G5 476 aa26.27■■□□□ 1.8
ECHDC1-203ENST00000368291 GPHNQ9NQX3 736 aaPredicted RBP26.27■■□□□ 1.8
ECHDC1-203ENST00000368291 SLC4A3P48751 1232 aa26.26■■□□□ 1.79
ECHDC1-203ENST00000368291 ADCK5Q3MIX3 580 aa26.26■■□□□ 1.79
ECHDC1-203ENST00000368291 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.26■■□□□ 1.79
ECHDC1-203ENST00000368291 KCNB2Q92953 911 aa26.26■■□□□ 1.79
ECHDC1-203ENST00000368291 UNC93B1Q9H1C4 597 aa26.26■■□□□ 1.79
ECHDC1-203ENST00000368291 ERICH2A1L162 156 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 PRC1O43663 620 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 WTAPQ15007 396 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 TMEM67Q5HYA8 995 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 MAP3K21Q5TCX8 1036 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 CCDC174Q6PII3 467 aa26.25■■□□□ 1.79
ECHDC1-203ENST00000368291 DPP9Q86TI2 863 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms