RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 SBF1O95248 1867 aa11.02□□□□□ -0.64
VTA1-201ENST00000367621 VPS37CA5D8V6 355 aaPredicted RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 SOWAHBA6NEL2 793 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 POTECB2RU33 542 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 MPHOSPH10O00566 681 aaKnown RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 CYTH3O43739 400 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 PDHBP11177 359 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 TNFAIP1Q13829 316 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 NBPF12Q5TAG4 269 aaPredicted RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 CPLX2Q6PUV4 134 aaKnown RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 LRRC47Q8N1G4 583 aaKnown RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 CTCFLQ8NI51 663 aaPredicted RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 ALG1Q9BT22 464 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 RNF26Q9BY78 433 aaPredicted RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
VTA1-201ENST00000367621 ADARB2Q9NS39 739 aaKnown RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 ZC3H4Q9UPT8 1303 aaKnown RBP11.02□□□□□ -0.65
VTA1-201ENST00000367621 hCG_1642624A0A1W2PR95 340 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 A0A1W2PRG0 241 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 GLTPD2A6NH11 291 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 GOLGA8HP0CJ92 632 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 KIF5BP33176 963 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 GUCY1B3Q02153 619 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 PRAMEF18Q5VWM3 479 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 KRT40Q6A162 431 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 FAM173BQ6P4H8 233 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 USP17L2Q6R6M4 530 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
VTA1-201ENST00000367621 FERMT3Q86UX7 667 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
VTA1-201ENST00000367621 C8orf76Q96K31 380 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 GGA3Q9NZ52 723 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 ZNF112Q9UJU3 913 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 KIF3AQ9Y496 699 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
VTA1-201ENST00000367621 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
VTA1-201ENST00000367621 DICER1Q9UPY3 1922 aaKnown RBP11□□□□□ -0.65
VTA1-201ENST00000367621 KIF28PB7ZC32 967 aa11□□□□□ -0.65
VTA1-201ENST00000367621 H3BQV1 296 aa11□□□□□ -0.65
VTA1-201ENST00000367621 DEXIO95424 95 aa11□□□□□ -0.65
VTA1-201ENST00000367621 CAP2P40123 477 aa11□□□□□ -0.65
VTA1-201ENST00000367621 ICA1Q05084 483 aa11□□□□□ -0.65
VTA1-201ENST00000367621 ZNF543Q08ER8 600 aa11□□□□□ -0.65
VTA1-201ENST00000367621 CAMK2BQ13554 666 aa11□□□□□ -0.65
VTA1-201ENST00000367621 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
VTA1-201ENST00000367621 DLK2Q6UY11 383 aa11□□□□□ -0.65
VTA1-201ENST00000367621 ACER1Q8TDN7 264 aa11□□□□□ -0.65
VTA1-201ENST00000367621 GBP4Q96PP9 640 aa11□□□□□ -0.65
VTA1-201ENST00000367621 CPVLQ9H3G5 476 aa11□□□□□ -0.65
VTA1-201ENST00000367621 LMBRD1Q9NUN5 540 aa11□□□□□ -0.65
VTA1-201ENST00000367621 FRMD4AQ9P2Q2 1039 aaPredicted RBP11□□□□□ -0.65
VTA1-201ENST00000367621 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 PARP1P09874 1014 aaKnown RBP10.99□□□□□ -0.65
VTA1-201ENST00000367621 SMARCA1P28370 1054 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 LMOD1P29536 600 aaPredicted RBP10.99□□□□□ -0.65
VTA1-201ENST00000367621 GNAQP50148 359 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 KIF23Q02241 960 aaPredicted RBP10.99□□□□□ -0.65
VTA1-201ENST00000367621 DNM1Q05193 864 aaKnown RBP10.99□□□□□ -0.65
VTA1-201ENST00000367621 NPY5RQ15761 445 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 FOXD4L6Q3SYB3 417 aaPredicted RBP10.99□□□□□ -0.65
VTA1-201ENST00000367621 MCTP1Q6DN14 999 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 FOXD4L3Q6VB84 417 aaPredicted RBP10.99□□□□□ -0.65
VTA1-201ENST00000367621 TRIM22Q8IYM9 498 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 GMCL1P1Q8NEA9 526 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 LZTS2Q9BRK4 669 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 SPZ1Q9BXG8 430 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 RIOX1Q9H6W3 641 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 CABP5Q9NP86 173 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 MTMR7Q9Y216 660 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 PPP2R3BQ9Y5P8 575 aa10.99□□□□□ -0.65
VTA1-201ENST00000367621 F5H6K3 240 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 CTNND1O60716 968 aaKnown RBP10.98□□□□□ -0.65
VTA1-201ENST00000367621 U2AF2P26368 475 aaKnown RBP eCLIP10.98□□□□□ -0.654e-6■■□□□ 13.2
VTA1-201ENST00000367621 EPHX2P34913 555 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 ECE1P42892 770 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 ATP2B2Q01814 1243 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 KLRC3Q07444 240 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 PFKFB3Q16875 520 aaPredicted RBP10.98□□□□□ -0.65
VTA1-201ENST00000367621 ASPRV1Q53RT3 343 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 TTBK2Q6IQ55 1244 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 USP50Q70EL3 339 aaPredicted RBP10.98□□□□□ -0.65
VTA1-201ENST00000367621 TMEM87AQ8NBN3 555 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 WASF1Q92558 559 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 ZFRQ96KR1 1074 aaKnown RBP10.98□□□□□ -0.65
VTA1-201ENST00000367621 GLIS2Q9BZE0 524 aaPredicted RBP10.98□□□□□ -0.65
VTA1-201ENST00000367621 UBA5Q9GZZ9 404 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 ZSCAN16Q9H4T2 348 aaPredicted RBP10.98□□□□□ -0.65
VTA1-201ENST00000367621 SYNPO2Q9UMS6 1093 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 KCNJ14Q9UNX9 436 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 CNPY2Q9Y2B0 182 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 TMX2Q9Y320 296 aa10.98□□□□□ -0.65
VTA1-201ENST00000367621 FRMPD2Q68DX3 1309 aaPredicted RBP10.98□□□□□ -0.65
VTA1-201ENST00000367621 ADM5C9JUS6 153 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms