RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 SPZ1Q9BXG8 430 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 ZNF215Q9UL58 517 aaPredicted RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 YARSP54577 528 aaKnown RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 MORC3Q14149 939 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 HERC4Q5GLZ8 1057 aaPredicted RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 RINT1Q6NUQ1 792 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 KSR1Q8IVT5 923 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 NLRP7Q8WX94 980 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 XPO4Q9C0E2 1151 aaKnown RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 RRP15Q9Y3B9 282 aaKnown RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 TCHHQ07283 1943 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 PDE6CP51160 858 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 TRIM42Q8IWZ5 723 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 ANO3Q9BYT9 981 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 CD2APQ9Y5K6 639 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 A0A1W2PQ27 194 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 A0A1W2PQ64 194 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 A0A1W2PQD8 194 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 HNRNPCL2B2RXH8 293 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 KCNK3O14649 394 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 RIMBP2O15034 1052 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 ZBTB24O43167 697 aaPredicted RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 LPXNO60711 386 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 HNRNPCL1O60812 293 aaKnown RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 UFL1O94874 794 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 ECE1P42892 770 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 MCTP2Q6DN12 878 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
SYNE1-208ENST00000367256 CCDC197Q8NCU1 140 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 FBXO41Q8TF61 875 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 POLKQ9UBT6 870 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 ATP6V1E1P36543 226 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 IL1RL1Q01638 556 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 TTC6Q86TZ1 520 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 DCLK2Q8N568 766 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 CCHCR1Q8TD31 782 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 NT5C3AQ9H0P0 336 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 CCDC68Q9H2F9 335 aa8□□□□□ -1.13
SYNE1-208ENST00000367256 GSTA4O15217 222 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 LIG3P49916 1009 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 PDZD4Q76G19 769 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 C8orf58Q8NAV2 365 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CCDC124Q96CT7 223 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 PPP2R2CQ9Y2T4 447 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 KIAA0232Q92628 1395 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SPDYE16A6NNV3 312 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 EIF3CLB5ME19 914 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SAT1P21673 171 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 LRMPQ12912 555 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SPDYE2Q495Y8 402 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 EIF3CQ99613 913 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 BLZF1Q9H2G9 400 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 TRPC6Q9Y210 931 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 GARSP41250 739 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SLC39A6Q13433 755 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 NBPF9Q3BBW0 867 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 TMTC4Q5T4D3 741 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 LRRC8AQ8IWT6 810 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ZNF710Q8N1W2 664 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 RETREG2Q8NC44 543 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SMYD2Q9NRG4 433 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 PALM3A6NDB9 673 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CWF19L2Q2TBE0 894 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ST7Q9NRC1 585 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 LRWD1Q9UFC0 647 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 PLB1Q6P1J6 1458 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CYP2J2P51589 502 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 RCN2Q14257 317 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ALS2CLQ60I27 953 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 BCAS4Q8TDM0 211 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 LRRC8CQ8TDW0 803 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 PPWD1Q96BP3 646 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 C1orf112Q9NSG2 853 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ABCB4P21439 1286 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 VPS41P49754 854 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ZKSCAN8Q15776 578 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ARHGAP44Q17R89 818 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SLFNL1Q499Z3 407 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CNBD1Q8NA66 436 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 MAST3O60307 1309 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 DENND4BO75064 1496 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CPA1P15085 419 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ADKP55263 362 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CHRNA2Q15822 529 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 RSBN1LQ6PCB5 846 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 TPTE2Q6XPS3 522 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 TDRD7Q8NHU6 1098 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ZMAT2Q96NC0 199 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 DESI2Q9BSY9 194 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 MIS12Q9H081 205 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 RNF8O76064 485 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ATICP31939 592 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 TMED1Q13445 227 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 GPBP1Q86WP2 473 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 NME8Q8N427 588 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 TEKT1Q969V4 418 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 EIF2AQ9BY44 585 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 IVNS1ABPQ9Y6Y0 642 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 SEC24BO95487 1268 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms