RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 VCAM1P19320 739 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 ERVK-9P63128 1117 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 ERVK-24P63145 666 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 Q3C1V9 767 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 C12orf60Q5U649 245 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 TSHZ3Q63HK5 1081 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 ZSCAN25Q6NSZ9 544 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 CATSPERGQ6ZRH7 1159 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 KBTBD3Q8NAB2 608 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 U2AF1L4Q8WU68 220 aaKnown RBP13.37□□□□□ -0.27
H3F3A-203ENST00000366815 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
H3F3A-203ENST00000366815 DYNLL2Q96FJ2 89 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
H3F3A-203ENST00000366815 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
H3F3A-203ENST00000366815 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
H3F3A-203ENST00000366815 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 USP17L12C9JPN9 530 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 USP17L21D6R901 530 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 ACTN4O43707 911 aaKnown RBP13.36□□□□□ -0.27
H3F3A-203ENST00000366815 CNMDO75829 334 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 SGPL1O95470 568 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 LBX2Q6XYB7 198 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 TMEM179Q6ZVK1 233 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 PORCNQ9H237 461 aa13.36□□□□□ -0.27
H3F3A-203ENST00000366815 MPHOSPH10O00566 681 aaKnown RBP13.35□□□□□ -0.27
H3F3A-203ENST00000366815 LCE2BO14633 110 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 TLL1O43897 1013 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 HMGCRP04035 888 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 MAPK4P31152 587 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 CDK8P49336 464 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 USP6NLQ92738 828 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 STRBPQ96SI9 672 aaKnown RBP13.35□□□□□ -0.27
H3F3A-203ENST00000366815 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
H3F3A-203ENST00000366815 CEP290O15078 2479 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 RNF223E7ERA6 249 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
H3F3A-203ENST00000366815 AKR1B1P15121 316 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 TRIM32Q13049 653 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 KIAA1755Q5JYT7 1200 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 MORN1Q5T089 497 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 CTR9Q6PD62 1173 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 GPR142Q7Z601 462 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 CLEC10AQ8IUN9 316 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 OTUD7AQ8TE49 926 aaPredicted RBP13.34□□□□□ -0.27
H3F3A-203ENST00000366815 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 TRIB2Q92519 343 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 APPBP2Q92624 585 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 CCDC17Q96LX7 622 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 DEFB118Q96PH6 123 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 NUDT12Q9BQG2 462 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
H3F3A-203ENST00000366815 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
H3F3A-203ENST00000366815 GSG1L2A8MUP6 293 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 RNF113AO15541 343 aaKnown RBP13.33□□□□□ -0.28
H3F3A-203ENST00000366815 FARP2O94887 1054 aaPredicted RBP13.33□□□□□ -0.28
H3F3A-203ENST00000366815 CAPN2P17655 700 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 CYP2B6P20813 491 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 MAP3K21Q5TCX8 1036 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 AMOTL1Q8IY63 956 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 DDRGK1Q96HY6 314 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.33□□□□□ -0.28
H3F3A-203ENST00000366815 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.28
H3F3A-203ENST00000366815 TMX2Q9Y320 296 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 SALL3Q9BXA9 1300 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
H3F3A-203ENST00000366815 ROBO3Q96MS0 1386 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 ZNF236Q9UL36 1845 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
H3F3A-203ENST00000366815 ICA1Q05084 483 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 SBK1Q52WX2 424 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 GIMAP6Q6P9H5 292 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 PLEKHH3Q7Z736 793 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 RPTORQ8N122 1335 aa13.32□□□□□ -0.28
H3F3A-203ENST00000366815 M0R2C6 588 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 GPAA1O43292 621 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 SLC19A1P41440 591 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 GCGRP47871 477 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 CCNA1P78396 465 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 COG2Q14746 738 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 LPAR1Q92633 364 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.31□□□□□ -0.28
H3F3A-203ENST00000366815 VCPKMTQ9H867 229 aa13.31□□□□□ -0.28
H3F3A-203ENST00000366815 ARHGEF10LQ9HCE6 1279 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms