RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ID3Q02535 119 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 CYP27C1Q4G0S4 372 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 FBF1Q8TES7 1133 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 KCNB2Q92953 911 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 FMNL2Q96PY5 1086 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 KRTAP4-12Q9BQ66 201 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 C1GALT1Q9NS00 363 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 ZC3H7BQ9UGR2 993 aaKnown RBP10.5□□□□□ -0.73
H3F3A-201ENST00000366813 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
H3F3A-201ENST00000366813 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
H3F3A-201ENST00000366813 FOXN1O15353 648 aa10.49□□□□□ -0.73
H3F3A-201ENST00000366813 DYNC1LI2O43237 492 aaPredicted RBP10.49□□□□□ -0.73
H3F3A-201ENST00000366813 RNGTTO60942 597 aaKnown RBP10.49□□□□□ -0.73
H3F3A-201ENST00000366813 XRCC5P13010 732 aaKnown RBP10.49□□□□□ -0.73
H3F3A-201ENST00000366813 FLCNQ8NFG4 579 aa10.49□□□□□ -0.73
H3F3A-201ENST00000366813 BCO2Q9BYV7 579 aa10.49□□□□□ -0.73
H3F3A-201ENST00000366813 CRIM1Q9NZV1 1036 aa10.49□□□□□ -0.73
H3F3A-201ENST00000366813 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
H3F3A-201ENST00000366813 TMPRSS2O15393 492 aa10.48□□□□□ -0.73
H3F3A-201ENST00000366813 PI16Q6UXB8 463 aa10.48□□□□□ -0.73
H3F3A-201ENST00000366813 SEZ6L2Q6UXD5 910 aa10.48□□□□□ -0.73
H3F3A-201ENST00000366813 ABHD8Q96I13 439 aa10.48□□□□□ -0.73
H3F3A-201ENST00000366813 FANCD2OSQ96PS1 177 aa10.48□□□□□ -0.73
H3F3A-201ENST00000366813 DUSP9Q99956 384 aaKnown RBP10.48□□□□□ -0.73
H3F3A-201ENST00000366813 ZNF862O60290 1169 aa10.47□□□□□ -0.73
H3F3A-201ENST00000366813 ARHGAP27Q6ZUM4 889 aa10.47□□□□□ -0.73
H3F3A-201ENST00000366813 KRTAP1-3Q8IUG1 177 aa10.47□□□□□ -0.73
H3F3A-201ENST00000366813 SMYD4Q8IYR2 804 aaPredicted RBP10.47□□□□□ -0.73
H3F3A-201ENST00000366813 AGBL5Q8NDL9 886 aa10.47□□□□□ -0.73
H3F3A-201ENST00000366813 SMC1BQ8NDV3 1235 aa10.47□□□□□ -0.73
H3F3A-201ENST00000366813 PRDM10Q9NQV6 1147 aa10.47□□□□□ -0.73
H3F3A-201ENST00000366813 KRT82Q9NSB4 513 aa10.47□□□□□ -0.73
H3F3A-201ENST00000366813 CDK19Q9BWU1 502 aa10.46□□□□□ -0.73
H3F3A-201ENST00000366813 SSU72Q9NP77 194 aaKnown RBP10.46□□□□□ -0.73
H3F3A-201ENST00000366813 RNF19AQ9NV58 838 aa10.46□□□□□ -0.73
H3F3A-201ENST00000366813 PPIP5K1Q6PFW1 1433 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 COL18A1P39060 1754 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 RBM25P49756 843 aaKnown RBP10.45□□□□□ -0.74
H3F3A-201ENST00000366813 KIF4BQ2VIQ3 1234 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
H3F3A-201ENST00000366813 LCE3BQ5TA77 95 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 C9orf131Q5VYM1 1079 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 NXPE4Q6UWF7 544 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 SMIM5Q71RC9 77 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 PARP2Q9UGN5 583 aa10.45□□□□□ -0.74
H3F3A-201ENST00000366813 CCNL1Q9UK58 526 aaPredicted RBP10.45□□□□□ -0.74
H3F3A-201ENST00000366813 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
H3F3A-201ENST00000366813 CICQ96RK0 1608 aaPredicted RBP10.44□□□□□ -0.74
H3F3A-201ENST00000366813 SULF2Q8IWU5 870 aa10.44□□□□□ -0.74
H3F3A-201ENST00000366813 SYTL4Q96C24 671 aaPredicted RBP10.44□□□□□ -0.74
H3F3A-201ENST00000366813 DISC1Q9NRI5 854 aa10.44□□□□□ -0.74
H3F3A-201ENST00000366813 SLC5A6Q9Y289 635 aa10.44□□□□□ -0.74
H3F3A-201ENST00000366813 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
H3F3A-201ENST00000366813 CCDC85CA6NKD9 419 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 FAM87AP0C7U9 286 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 ARNTP27540 789 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 GNA15P30679 374 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 RGS19P49795 217 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 CDK5R2Q13319 367 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 TTLL4Q14679 1199 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 ARHGEF25Q86VW2 580 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 EMILIN2Q9BXX0 1053 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 CBX8Q9HC52 389 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 PCOLCE2Q9UKZ9 415 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 TRPM1Q7Z4N2 1603 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 KDM2BQ8NHM5 1336 aa10.43□□□□□ -0.74
H3F3A-201ENST00000366813 HCLS1P14317 486 aaPredicted RBP10.42□□□□□ -0.74
H3F3A-201ENST00000366813 DAB2P98082 770 aa10.42□□□□□ -0.74
H3F3A-201ENST00000366813 TMC4Q7Z404 712 aa10.42□□□□□ -0.74
H3F3A-201ENST00000366813 FRMD6Q96NE9 622 aa10.42□□□□□ -0.74
H3F3A-201ENST00000366813 ITSN1Q15811 1721 aa10.42□□□□□ -0.74
H3F3A-201ENST00000366813 ABCC6O95255 1503 aa10.42□□□□□ -0.74
H3F3A-201ENST00000366813 IL2RBP14784 551 aa10.41□□□□□ -0.74
H3F3A-201ENST00000366813 CTCFP49711 727 aaPredicted RBP10.41□□□□□ -0.74
H3F3A-201ENST00000366813 LBX1P52954 281 aa10.41□□□□□ -0.74
H3F3A-201ENST00000366813 MAP1SQ66K74 1059 aaPredicted RBP10.41□□□□□ -0.74
H3F3A-201ENST00000366813 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
H3F3A-201ENST00000366813 PAK6Q9NQU5 681 aaPredicted RBP10.41□□□□□ -0.74
H3F3A-201ENST00000366813 SPG7Q9UQ90 795 aa10.41□□□□□ -0.74
H3F3A-201ENST00000366813 CPSF1Q10570 1443 aaKnown RBP10.41□□□□□ -0.74
H3F3A-201ENST00000366813 ADGRB1O14514 1584 aa10.41□□□□□ -0.74
H3F3A-201ENST00000366813 A0A0G2JLW4 131 aa10.4□□□□□ -0.74
H3F3A-201ENST00000366813 NME2P22392 152 aa10.4□□□□□ -0.74
H3F3A-201ENST00000366813 NFXL1Q6ZNB6 911 aa10.4□□□□□ -0.74
H3F3A-201ENST00000366813 PDZD3Q86UT5 571 aa10.4□□□□□ -0.74
H3F3A-201ENST00000366813 MRRFQ96E11 262 aaKnown RBP10.4□□□□□ -0.74
H3F3A-201ENST00000366813 FAM161BQ96MY7 647 aa10.4□□□□□ -0.74
H3F3A-201ENST00000366813 RGPD5Q99666 1765 aa10.4□□□□□ -0.75
H3F3A-201ENST00000366813 SLIT3O75094 1523 aa10.39□□□□□ -0.75
H3F3A-201ENST00000366813 PSMD2Q13200 908 aa10.39□□□□□ -0.75
H3F3A-201ENST00000366813 AMIGO3Q86WK7 504 aa10.39□□□□□ -0.75
H3F3A-201ENST00000366813 STK35Q8TDR2 534 aa10.39□□□□□ -0.75
H3F3A-201ENST00000366813 BCL7CQ8WUZ0 217 aaPredicted RBP10.39□□□□□ -0.75
H3F3A-201ENST00000366813 ASIC4Q96FT7 647 aa10.39□□□□□ -0.75
H3F3A-201ENST00000366813 KIAA1522Q9P206 1035 aaPredicted RBP10.39□□□□□ -0.75
H3F3A-201ENST00000366813 SAMM50Q9Y512 469 aa10.39□□□□□ -0.75
H3F3A-201ENST00000366813 C10orf71Q711Q0 1435 aa10.39□□□□□ -0.75
H3F3A-201ENST00000366813 KIAA1210Q9ULL0 1709 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms