RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 CDR2Q01850 454 aa12.11□□□□□ -0.47
CDC42BPA-205ENST00000366769 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
CDC42BPA-205ENST00000366769 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
CDC42BPA-205ENST00000366769 PTPRGP23470 1445 aa12.11□□□□□ -0.47
CDC42BPA-205ENST00000366769 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 CNOT10Q9H9A5 744 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 DAPK1P53355 1430 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 MUM1L1Q5H9M0 696 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 ANKRD20A3Q5VUR7 823 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 BRAPQ7Z569 592 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 TMEM154Q6P9G4 183 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 C2CD5Q86YS7 1000 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 TRIM11Q96F44 468 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 SLC40A1Q9NP59 571 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 EIF2AK4Q9P2K8 1649 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 POLR2DO15514 142 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 ALS2CLQ60I27 953 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 GSTO1P78417 241 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 LDHAL6AQ6ZMR3 332 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 OGFOD1Q8N543 542 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 POMGNT1Q8WZA1 660 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 BZW2Q9Y6E2 419 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 BUB1O43683 1085 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 UBL4BQ8N7F7 174 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 RTEL1-TNFRSF6BF6WH68 1400 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 PEX26Q7Z412 305 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 SLC4A4Q9Y6R1 1079 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 IL1RL1Q01638 556 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 CAPN12Q6ZSI9 719 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 CCDC105Q8IYK2 499 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 ENAHQ8N8S7 591 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 NFU1Q9UMS0 254 aa12.1□□□□□ -0.47
CDC42BPA-205ENST00000366769 ESYT2A0FGR8 921 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 LSM1O15116 133 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 TEKT4Q8WW24 435 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 MAML1Q92585 1016 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 SNX1Q13596 522 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 CASP10Q92851 521 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 FNBP1Q96RU3 617 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 KCNJ12Q14500 433 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 MRGBPQ9NV56 204 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 PALD1Q9ULE6 856 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 TROVE2P10155 538 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 BASP1P80723 227 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 FOXD4Q12950 439 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 RPS6KA1Q15418 735 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 NSMCE1Q8WV22 266 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 SCYL1Q96KG9 808 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 VWA3AA6NCI4 1184 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 SLC12A2P55011 1212 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 HDAC9Q9UKV0 1011 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 JAG2Q9Y219 1238 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 JAK2O60674 1132 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 MEIS3Q99687 375 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 CTIFO43310 598 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 RXRAP19793 462 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 SRGAP2O75044 1071 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 TRAF3IP3Q9Y228 551 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
CDC42BPA-205ENST00000366769 DDIT3P35638 169 aa12.08□□□□□ -0.47
CDC42BPA-205ENST00000366769 SERPINB4P48594 390 aa12.08□□□□□ -0.47
CDC42BPA-205ENST00000366769 ERFP50548 548 aa12.08□□□□□ -0.47
CDC42BPA-205ENST00000366769 CCDC15Q0P6D6 951 aa12.08□□□□□ -0.47
CDC42BPA-205ENST00000366769 ZNF827Q17R98 1081 aa12.08□□□□□ -0.47
CDC42BPA-205ENST00000366769 HIPK4Q8NE63 616 aa12.08□□□□□ -0.47
CDC42BPA-205ENST00000366769 INTS9Q9NV88 658 aaKnown RBP12.08□□□□□ -0.47
CDC42BPA-205ENST00000366769 CRYMQ14894 314 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 LMBRD2Q68DH5 695 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 KIF2BQ8N4N8 673 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 KIFAP3Q92845 792 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 TEKT1Q969V4 418 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 GSTA1P08263 222 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 GSTA2P09210 222 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 OLFM3Q96PB7 478 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 MLXIPLQ9NP71 852 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 KCNK3O14649 394 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 THAP12O43422 761 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 POSTNQ15063 836 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 UIMC1Q96RL1 719 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 MAP3K21Q5TCX8 1036 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 SH2D4AQ9H788 454 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 SMYD3Q9H7B4 428 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 MMEP08473 750 aa12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 NOC4LQ9BVI4 516 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-205ENST00000366769 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms