RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SRGAP1Q7Z6B7 1085 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 DGKHQ86XP1 1220 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 ARFGAP2Q8N6H7 521 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 NT5C3AQ9H0P0 336 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 CDC23Q9UJX2 597 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 RHOXF2BP0C7M4 288 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 HAUS3Q68CZ6 603 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 ZNF365Q70YC5 407 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 SYMPKQ92797 1274 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 ZBTB9Q96C00 473 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 DHTKD1Q96HY7 919 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 RHOXF2Q9BQY4 288 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 KDM3AQ9Y4C1 1321 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 MORC3Q14149 939 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 BSDC1Q9NW68 430 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 GUCA1BQ9UMX6 200 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 MYO5BQ9ULV0 1848 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 DTNBO60941 627 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 PEX19P40855 299 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 COPB1P53618 953 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 CASP7P55210 303 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 LETM2Q2VYF4 491 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 CYB5R4Q7L1T6 521 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 DDX27Q96GQ7 796 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 PPP1R12CQ9BZL4 782 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 TRIM4Q9C037 500 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 ZC3H12CQ9C0D7 883 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 SH3BGRP55822 239 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 PTGDRQ13258 359 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 NDUFAB1O14561 156 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 RPN1P04843 607 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CETN2P41208 172 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 HSPA2P54652 639 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 PDE1CQ14123 709 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CLUL1Q15846 466 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 STMN2Q93045 179 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 FTOQ9C0B1 505 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 KCNJ18B7U540 433 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 TBCAO75347 108 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 POTEJP0CG39 1038 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCT6AP40227 531 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 KCNJ12Q14500 433 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 GOLGA5Q8TBA6 731 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SECISBP2LQ93073 1101 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 GGA1Q9UJY5 639 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CTIFO43310 598 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CTDNEP1O95476 244 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SETDB1Q15047 1291 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SUSD4Q5VX71 490 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 TRIM58Q8NG06 486 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 KCNF1Q9H3M0 494 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 LRWD1Q9UFC0 647 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SLC9C1Q4G0N8 1177 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 TMC4Q7Z404 712 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 TBC1D10CQ8IV04 446 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CNPY4Q8N129 248 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 LCORLQ8N3X6 602 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 PNMA1Q8ND90 353 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SDR42E1Q8WUS8 393 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SMC6Q96SB8 1091 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 DDX23Q9BUQ8 820 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 THAP9Q9H5L6 903 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 ADCY7P51828 1080 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 VAV2P52735 878 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 ADKP55263 362 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SEPT2Q15019 361 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 NEK8Q86SG6 692 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SPAG5Q96R06 1193 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CAPN7Q9Y6W3 813 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 SLIT3O75094 1523 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCNT1O60563 726 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 USP37Q86T82 979 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 MICAL1Q8TDZ2 1067 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 TBC1D5Q92609 795 aa5.95□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCDC151A5D8V7 595 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 OR52Z1P0C646 297 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 CRKLP46109 303 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 HLFQ16534 295 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCDC38Q502W7 563 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 ANKRD7Q92527 254 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 VEZTQ9HBM0 779 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 KIF1AQ12756 1690 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 FRMD3A2A2Y4 597 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 TNNC1P63316 161 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 DDX12PQ92771 950 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 GBP5Q96PP8 586 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 RIC8AQ9NPQ8 531 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 CALUO43852 315 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 WDHD1O75717 1129 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 CIB2O75838 187 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 RASGRF1Q13972 1273 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 ERCC6LQ2NKX8 1250 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 TRMT44Q8IYL2 757 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCDC170Q8IYT3 715 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 IGDCC4Q8TDY8 1250 aa5.94□□□□□ -1.46
CDC42BPA-204ENST00000366767 TAB2Q9NYJ8 693 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms