RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PTPAQ15257 358 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 PTPROQ16827 1216 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 CCDC13Q8IYE1 715 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 THOC1Q96FV9 657 aaKnown RBP14.17□□□□□ -0.14
VAMP1-201ENST00000361716 SLC40A1Q9NP59 571 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 ADD3Q9UEY8 706 aaKnown RBP14.17□□□□□ -0.14
VAMP1-201ENST00000361716 GOLGA8KD6RF30 607 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 IQCEQ6IPM2 695 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 TSEN2Q8NCE0 465 aaKnown RBP14.17□□□□□ -0.14
VAMP1-201ENST00000361716 RNF217Q8TC41 542 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 SDR42E1Q8WUS8 393 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 TACO1Q9BSH4 297 aaKnown RBP14.17□□□□□ -0.14
VAMP1-201ENST00000361716 GREM2Q9H772 168 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 PXDNLA1KZ92 1463 aa14.17□□□□□ -0.14
VAMP1-201ENST00000361716 GOLGA6L10A6NI86 522 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 ENO4A6NNW6 628 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 HGSO14964 777 aaPredicted RBP14.16□□□□□ -0.14
VAMP1-201ENST00000361716 ZFYP08048 801 aaPredicted RBP14.16□□□□□ -0.14
VAMP1-201ENST00000361716 DCAF5Q96JK2 942 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 PIH1D3Q9NQM4 214 aaKnown RBP14.16□□□□□ -0.14
VAMP1-201ENST00000361716 EP400Q96L91 3159 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 MORC3Q14149 939 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 NAA35Q5VZE5 725 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 BTG4Q9NY30 223 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 TRPM3Q9HCF6 1732 aaPredicted RBP14.16□□□□□ -0.14
VAMP1-201ENST00000361716 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 MICAL1Q8TDZ2 1067 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 ZMYM6O95789 1325 aa14.16□□□□□ -0.14
VAMP1-201ENST00000361716 MYBL1P10243 752 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 XBP1P17861 261 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 LSP1P33241 339 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 KIF5AQ12840 1032 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 TTMPQ5BVD1 217 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 C8orf74Q6P047 294 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 ZNF473Q8WTR7 871 aaKnown RBP14.15□□□□□ -0.14
VAMP1-201ENST00000361716 LACRTQ9GZZ8 138 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 NFU1Q9UMS0 254 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 CYP2D7A0A087X1C5 515 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 TTC26A0AVF1 554 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 ANKRD18BA2A2Z9 1011 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 OPLAHO14841 1288 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 BUB1BO60566 1050 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-201ENST00000361716 KIF4AO95239 1232 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 TRAPPC11Q7Z392 1133 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 KRT26Q7Z3Y9 468 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 NACAP1Q9BZK3 213 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 SPATA31A3Q5VYP0 1347 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 LTN1O94822 1766 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 UBAP1LF5GYI3 381 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 NCK2O43639 380 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 PDE6AP16499 860 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 PAFAH1B1P43034 410 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 COPB1P53618 953 aaKnown RBP14.15□□□□□ -0.14
VAMP1-201ENST00000361716 TTF1Q15361 905 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-201ENST00000361716 SPA17Q15506 151 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 PROCA1Q8NCQ7 364 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-201ENST00000361716 TCP11Q8WWU5 503 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 ZIM3Q96PE6 472 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 UIMC1Q96RL1 719 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 CCT8L2Q96SF2 557 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 HAUS4Q9H6D7 363 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 UBN2Q6ZU65 1347 aa14.15□□□□□ -0.14
VAMP1-201ENST00000361716 GRIN2DO15399 1336 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 ZSCAN5CA6NGD5 496 aaPredicted RBP14.14□□□□□ -0.15
VAMP1-201ENST00000361716 KCNJ18B7U540 433 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 CLTAP09496 248 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 AMPD2Q01433 879 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 MAP3K12Q12852 859 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 KCNJ12Q14500 433 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
VAMP1-201ENST00000361716 FMNL3Q8IVF7 1028 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 DNAJC10Q8IXB1 793 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 TEX11Q8IYF3 940 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 OR8K1Q8NGG5 319 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 SPDL1Q96EA4 605 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 SMIM22K7EJ46 135 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 GCFC2P16383 781 aaKnown RBP14.14□□□□□ -0.15
VAMP1-201ENST00000361716 NR1D1P20393 614 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 VAV2P52735 878 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 GUCY2DQ02846 1103 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 PPP1R7Q15435 360 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 SYMPKQ92797 1274 aaKnown RBP14.14□□□□□ -0.15
VAMP1-201ENST00000361716 SGSM3Q96HU1 749 aa14.14□□□□□ -0.15
VAMP1-201ENST00000361716 TRIM49BA6NDI0 452 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 H7C1W4 665 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 SH2B2O14492 632 aaPredicted RBP14.13□□□□□ -0.15
VAMP1-201ENST00000361716 PPP1R12AO14974 1030 aaPredicted RBP14.13□□□□□ -0.15
VAMP1-201ENST00000361716 NLRP5P59047 1200 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 PARP9Q8IXQ6 854 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 WASF1Q92558 559 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 MAGEC2Q9UBF1 373 aaPredicted RBP14.13□□□□□ -0.15
VAMP1-201ENST00000361716 DDX20Q9UHI6 824 aaKnown RBP14.13□□□□□ -0.15
VAMP1-201ENST00000361716 MYO1EQ12965 1108 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 RABL6Q3YEC7 729 aaPredicted RBP14.13□□□□□ -0.15
VAMP1-201ENST00000361716 CPLX4Q7Z7G2 160 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 CALR3Q96L12 384 aaKnown RBP14.13□□□□□ -0.15
VAMP1-201ENST00000361716 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
VAMP1-201ENST00000361716 MLXIPQ9HAP2 919 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms