RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 KDM3BQ7LBC6 1761 aa10.1□□□□□ -0.79
CALD1-201ENST00000361675 GIGYF1O75420 1035 aaPredicted RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 STIP1P31948 543 aaKnown RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 MRPL12P52815 198 aaKnown RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 SEC24CP53992 1094 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 RNF168Q8IYW5 571 aaPredicted RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 JDP2Q8WYK2 163 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 DHRS1Q96LJ7 313 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 EPAS1Q99814 870 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 TEX13AQ9BXU3 409 aaPredicted RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 RPAP1Q9BWH6 1393 aaPredicted RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 SYNRGQ9UMZ2 1314 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 DIAPH2O60879 1101 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 CUTAO60888 179 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 PDHA1P08559 390 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 CD53P19397 219 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 NCAPH2Q6IBW4 605 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 TRIM65Q6PJ69 517 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 LARP1Q6PKG0 1096 aaKnown RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 RUFY3Q7L099 469 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 NANOGNBQ7Z5D8 188 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 CCDC170Q8IYT3 715 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 SH2D3CQ8N5H7 860 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 TRIM58Q8NG06 486 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 INTUQ9ULD6 942 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 GOLGA6L9A6NEM1 432 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 EIF3HO15372 352 aaKnown RBP eCLIP10.09□□□□□ -0.79
CALD1-201ENST00000361675 BIRC3Q13489 604 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 KCTD2Q14681 263 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 DIXDC1Q155Q3 683 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 TOGARAM2Q6ZUX3 1019 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 CCDC80Q76M96 950 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 USP33Q8TEY7 942 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 FTOQ9C0B1 505 aaKnown RBP eCLIP10.09□□□□□ -0.792e-6■■□□□ 12.1
CALD1-201ENST00000361675 SCHIP1Q9P0W5 487 aaPredicted RBP10.09□□□□□ -0.79
CALD1-201ENST00000361675 MST1RQ04912 1400 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 NCAPD2Q15021 1401 aa10.09□□□□□ -0.79
CALD1-201ENST00000361675 PABPN1LA6NDY0 278 aaKnown RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 UBTFL1P0CB47 393 aaPredicted RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 TUFMP49411 452 aaKnown RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 DPCR1Q3MIW9 517 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 FILIP1LQ4L180 1135 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 NEK10Q6ZWH5 1172 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 ANKZF1Q9H8Y5 726 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 A1CFQ9NQ94 594 aaKnown RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 NLRP2Q9NX02 1062 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 PRELID1Q9Y255 219 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 PHRF1Q9P1Y6 1649 aaKnown RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 A0A1B0GVL5 298 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 LRRD1A4D1F6 860 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 ARHGAP6O43182 974 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 CTCFP49711 727 aaPredicted RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 ICA1Q05084 483 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 DDR1Q08345 913 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 CUL3Q13618 768 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 PDIA6Q15084 440 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 PTPROQ16827 1216 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 C4orf46Q504U0 113 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 SARM1Q6SZW1 724 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 RSRC2Q7L4I2 434 aaKnown RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 OSBPL9Q96SU4 736 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 LMO7Q8WWI1 1683 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 A0A1B0GVG6 124 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 VWA3AA6NCI4 1184 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 GUCY1A3Q02108 690 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 AIMP1Q12904 312 aaKnown RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 C14orf80Q86SX3 495 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 NDUFAF2Q8N183 169 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 NOA1Q8NC60 698 aaKnown RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 FAM81AQ8TBF8 368 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 ABTB1Q969K4 478 aaPredicted RBP10.08□□□□□ -0.8
CALD1-201ENST00000361675 CENPTQ96BT3 561 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 CDC23Q9UJX2 597 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 CDHR2Q9BYE9 1310 aa10.08□□□□□ -0.8
CALD1-201ENST00000361675 TGFB3P10600 412 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 SMTNP53814 917 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 RCSD1Q6JBY9 416 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 MGARPQ8TDB4 240 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 POLR3CQ9BUI4 534 aaPredicted RBP10.07□□□□□ -0.8
CALD1-201ENST00000361675 DHX36Q9H2U1 1008 aaKnown RBP10.07□□□□□ -0.8
CALD1-201ENST00000361675 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 BABAM1Q9NWV8 329 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 TBK1Q9UHD2 729 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 MAP3K2Q9Y2U5 619 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 MEGF6O75095 1541 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 KDM6AO15550 1401 aaPredicted RBP10.07□□□□□ -0.8
CALD1-201ENST00000361675 RTN2O75298 545 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 RTN3O95197 1032 aaPredicted RBP10.07□□□□□ -0.8
CALD1-201ENST00000361675 MYL1P05976 194 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 FAM163BP0C2L3 166 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 CYP11B2P19099 503 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 MAGEA10P43363 369 aaPredicted RBP10.07□□□□□ -0.8
CALD1-201ENST00000361675 PPP2R5CQ13362 524 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 TSNAXIP1Q2TAA8 658 aa10.07□□□□□ -0.8
CALD1-201ENST00000361675 C1orf141Q5JVX7 400 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms