RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 SART1O43290 800 aaKnown RBP6.92□□□□□ -1.3
RPL39-201ENST00000361575 PARNO95453 639 aaKnown RBP6.92□□□□□ -1.3
RPL39-201ENST00000361575 PDGFRBP09619 1106 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 ADGRE1Q14246 886 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 MBTPS1Q14703 1052 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 DENND5AQ6IQ26 1287 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 FGD2Q7Z6J4 655 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 FIBCD1Q8N539 461 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 SCLYQ96I15 445 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 DUSP23Q9BVJ7 150 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 CAAP1Q9H8G2 361 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 METTL14Q9HCE5 456 aaKnown RBP6.92□□□□□ -1.3
RPL39-201ENST00000361575 GFOD1Q9NXC2 390 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 FBXL21Q9UKT6 434 aa6.92□□□□□ -1.3
RPL39-201ENST00000361575 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.91□□□□□ -1.3
RPL39-201ENST00000361575 PIK3R2O00459 728 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 NOP56O00567 594 aaKnown RBP6.91□□□□□ -1.3
RPL39-201ENST00000361575 BMP3P12645 472 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 PPP2R5DQ14738 602 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 PRSS53Q2L4Q9 553 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 SLC35F1Q5T1Q4 408 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 BRAPQ7Z569 592 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 DDX42Q86XP3 938 aaKnown RBP eCLIP6.91□□□□□ -1.3
RPL39-201ENST00000361575 FAM20CQ8IXL6 584 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 AFAP1L2Q8N4X5 818 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 TMEM145Q8NBT3 493 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 GATA6Q92908 595 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 MCMBPQ9BTE3 642 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 NKX2-4Q9H2Z4 354 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
RPL39-201ENST00000361575 INTS7Q9NVH2 962 aaKnown RBP6.91□□□□□ -1.3
RPL39-201ENST00000361575 SFMBT1Q9UHJ3 866 aa6.91□□□□□ -1.3
RPL39-201ENST00000361575 SCG5P05408 212 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 MAP4P27816 1152 aaKnown RBP6.9□□□□□ -1.3
RPL39-201ENST00000361575 CNGA1P29973 690 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 GRB10Q13322 594 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 ZNF460Q14592 562 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 UVSSAQ2YD98 709 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 POMZP3Q6PJE2 187 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 STRA8Q7Z7C7 330 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 DTWD2Q8NBA8 298 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 PRR13Q9NZ81 148 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 MAGEC2Q9UBF1 373 aaPredicted RBP6.9□□□□□ -1.3
RPL39-201ENST00000361575 NDOR1Q9UHB4 597 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 MAPRE3Q9UPY8 281 aa6.9□□□□□ -1.3
RPL39-201ENST00000361575 ASXL2Q76L83 1435 aa6.9□□□□□ -1.31
RPL39-201ENST00000361575 SHISA3A0PJX4 238 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 PRR33A8MZF0 331 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 C9orf172C9J069 976 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 H0Y8X5 98 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 WIPF1O43516 503 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 VAMP4O75379 141 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 PRAMEF1O95521 474 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 EYA4O95677 639 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 CTSKP43235 329 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 MAP4K2Q12851 820 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 MAP7Q14244 749 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 NOL9Q5SY16 702 aaKnown RBP6.89□□□□□ -1.31
RPL39-201ENST00000361575 CNNM4Q6P4Q7 775 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 KREMEN2Q8NCW0 462 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
RPL39-201ENST00000361575 UTP4Q969X6 686 aaKnown RBP6.89□□□□□ -1.31
RPL39-201ENST00000361575 ZDHHC15Q96MV8 337 aa6.89□□□□□ -1.31
RPL39-201ENST00000361575 IPO9Q96P70 1041 aaKnown RBP6.89□□□□□ -1.31
RPL39-201ENST00000361575 DIS3Q9Y2L1 958 aaKnown RBP6.89□□□□□ -1.31
RPL39-201ENST00000361575 GPR55Q9Y2T6 319 aaPredicted RBP6.89□□□□□ -1.31
RPL39-201ENST00000361575 TNPO3Q9Y5L0 923 aaKnown RBP6.89□□□□□ -1.31
RPL39-201ENST00000361575 FAM95CA0A1B0GW59 222 aa6.88□□□□□ -1.31
RPL39-201ENST00000361575 ARNTLO00327 626 aa6.88□□□□□ -1.31
RPL39-201ENST00000361575 POU3F2P20265 443 aaPredicted RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 SOX5P35711 763 aa6.88□□□□□ -1.31
RPL39-201ENST00000361575 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 BRDTQ58F21 947 aaPredicted RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 SHISA5Q8N114 240 aa6.88□□□□□ -1.31
RPL39-201ENST00000361575 CRACR2BQ8N4Y2 399 aaPredicted RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 HEXIM2Q96MH2 286 aaKnown RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 YIPF2Q9BWQ6 316 aa6.88□□□□□ -1.31
RPL39-201ENST00000361575 MTFR1LQ9H019 292 aa6.88□□□□□ -1.31
RPL39-201ENST00000361575 TPX2Q9ULW0 747 aaKnown RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 ADAMTS8Q9UP79 889 aa6.88□□□□□ -1.31
RPL39-201ENST00000361575 THRAP3Q9Y2W1 955 aaKnown RBP6.88□□□□□ -1.31
RPL39-201ENST00000361575 SNRPB2P08579 225 aaKnown RBP6.87□□□□□ -1.31
RPL39-201ENST00000361575 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 RXRBP28702 533 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 HOXC12P31275 282 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 ADMP35318 185 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 GABREP78334 506 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 NFKB2Q00653 900 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 PCBP1Q15365 356 aaKnown RBP eCLIP6.87□□□□□ -1.31
RPL39-201ENST00000361575 SEPT7Q16181 437 aaKnown RBP6.87□□□□□ -1.31
RPL39-201ENST00000361575 PKN3Q6P5Z2 889 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 BEND7Q8N7W2 519 aaPredicted RBP6.87□□□□□ -1.31
RPL39-201ENST00000361575 KCTD13Q8WZ19 329 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 CYP26B1Q9NR63 512 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 TRAF6Q9Y4K3 522 aa6.87□□□□□ -1.31
RPL39-201ENST00000361575 U3KQE9 123 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms