RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 PDE6CP51160 858 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 SEPT14Q6ZU15 432 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 JPH2Q9BR39 696 aaPredicted RBP22.33■■□□□ 1.17
SMURF1-202ENST00000361368 CBX8Q9HC52 389 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 FAM207AQ9NSI2 230 aaPredicted RBP22.33■■□□□ 1.17
SMURF1-202ENST00000361368 SCYL2Q6P3W7 929 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 NEK8Q86SG6 692 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 KRT12Q99456 494 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 TSNAXIP1Q2TAA8 658 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 CCDC68Q9H2F9 335 aa22.33■■□□□ 1.17
SMURF1-202ENST00000361368 ESYT2A0FGR8 921 aa22.33■■□□□ 1.16
SMURF1-202ENST00000361368 PPFIA1Q13136 1202 aa22.33■■□□□ 1.16
SMURF1-202ENST00000361368 KCTD2Q14681 263 aa22.33■■□□□ 1.16
SMURF1-202ENST00000361368 TYW1BQ6NUM6 668 aa22.33■■□□□ 1.16
SMURF1-202ENST00000361368 CTAGE3PQ8IX95 158 aa22.33■■□□□ 1.16
SMURF1-202ENST00000361368 IPO11Q9UI26 975 aaKnown RBP22.33■■□□□ 1.16
SMURF1-202ENST00000361368 PCK1P35558 622 aa22.33■■□□□ 1.16
SMURF1-202ENST00000361368 ARMCX3Q9UH62 379 aaPredicted RBP22.33■■□□□ 1.16
SMURF1-202ENST00000361368 KAT6BQ8WYB5 2073 aa22.33■■□□□ 1.16
SMURF1-202ENST00000361368 MAP3K21Q5TCX8 1036 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 FAM178BQ8IXR5 827 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 IFNL3Q8IZI9 196 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 RPS6KC1Q96S38 1066 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 TPCN1Q9ULQ1 816 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 KIAA0232Q92628 1395 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 OR52Z1P0C646 297 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 POLGP54098 1239 aaPredicted RBP22.32■■□□□ 1.16
SMURF1-202ENST00000361368 PLA2G4DQ86XP0 818 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 ZBTB38Q8NAP3 1195 aaPredicted RBP22.32■■□□□ 1.16
SMURF1-202ENST00000361368 SLF1Q9BQI6 1058 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 NLRC4Q9NPP4 1024 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 SERTAD1Q9UHV2 236 aa22.32■■□□□ 1.16
SMURF1-202ENST00000361368 KIF3CO14782 793 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 TROVE2P10155 538 aaKnown RBP eCLIP22.31■■□□□ 1.16
SMURF1-202ENST00000361368 CEP120Q8N960 986 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 UIMC1Q96RL1 719 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 BTDP43251 543 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 PPP2R5AQ15172 486 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 TMC4Q7Z404 712 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 PNMA1Q8ND90 353 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 RNF40O75150 1001 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 ITKQ08881 620 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 TRIM58Q8NG06 486 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 OTUD7AQ8TE49 926 aaPredicted RBP22.31■■□□□ 1.16
SMURF1-202ENST00000361368 DDX25Q9UHL0 483 aaKnown RBP22.31■■□□□ 1.16
SMURF1-202ENST00000361368 ATP10AO60312 1499 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
SMURF1-202ENST00000361368 TYW5A2RUC4 315 aaKnown RBP22.31■■□□□ 1.16
SMURF1-202ENST00000361368 TLR3O15455 904 aaKnown RBP22.31■■□□□ 1.16
SMURF1-202ENST00000361368 PANK4Q9NVE7 773 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 ARHGEF12Q9NZN5 1544 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 RASSF2P50749 326 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 NOSTRINQ8IVI9 506 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 BBS5Q8N3I7 341 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 MIPOL1Q8TD10 442 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 CARD6Q9BX69 1037 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 SUGCTQ9HAC7 445 aa22.31■■□□□ 1.16
SMURF1-202ENST00000361368 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 RILPQ96NA2 401 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 PPFIA4O75335 1185 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 PTPREP23469 700 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 SLFN13Q68D06 897 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 EXOC8Q8IYI6 725 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 CCDC17Q96LX7 622 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 KLRF2D3W0D1 207 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 OSBPP22059 807 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 USP14P54578 494 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 KDRP35968 1356 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 PNMA6EA0A0J9YXQ4 647 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 hCG_1642624A0A1W2PR95 340 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 TTC36A6NLP5 189 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 PCCAP05165 728 aaPredicted RBP22.3■■□□□ 1.16
SMURF1-202ENST00000361368 ARHGAP25P42331 645 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 MYSM1Q5VVJ2 828 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 ABI1Q8IZP0 508 aa22.3■■□□□ 1.16
SMURF1-202ENST00000361368 ADALQ6DHV7 355 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 CDC37L1Q7L3B6 337 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 FRMPD2Q68DX3 1309 aaPredicted RBP22.29■■□□□ 1.16
SMURF1-202ENST00000361368 TECP42680 631 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 MTX1Q13505 466 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 ABCB5Q2M3G0 1257 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 ARMCX5Q6P1M9 558 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 KIAA0825Q8IV33 1275 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 FANCBQ8NB91 859 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 GTF3C6Q969F1 213 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 SEMA3EO15041 775 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 SCG2P13521 617 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 BBOF1Q8ND07 529 aa22.29■■□□□ 1.16
SMURF1-202ENST00000361368 KCNJ18B7U540 433 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 BPIFB4P59827 614 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 KCNJ12Q14500 433 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 OR8K1Q8NGG5 319 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 CABS1Q96KC9 395 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 IFT122Q9HBG6 1241 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 IFNB1P01574 187 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 RINT1Q6NUQ1 792 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms