RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 EEF1GP26641 437 aaKnown RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 CCZ1BP86790 482 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 CCZ1P86791 482 aaPredicted RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 E2F5Q15329 346 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 NDUFA10O95299 355 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 PLS1Q14651 629 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 ZNF365Q70YC5 407 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 NELFCDQ8IXH7 590 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 ARHGAP24Q8N264 748 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 CNOT6LQ96LI5 555 aaKnown RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 ZSCAN10Q96SZ4 725 aaPredicted RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 EPC1Q9H2F5 836 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 DPH5Q9H2P9 285 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 HOMER3Q9NSC5 361 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 PPP1R1BQ9UD71 204 aaPredicted RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 PCDH11XQ9BZA7 1347 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 PCDH11YQ9BZA8 1340 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 ANKRD65E5RJM6 399 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 CCDC170Q8IYT3 715 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMC5-201ENST00000361138 KIFAP3Q92845 792 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 SIRT1Q96EB6 747 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 UNC13BO14795 1591 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 HEXIM1O94992 359 aaKnown RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 LONP1P36776 959 aaKnown RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 PEX19P40855 299 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 UAP1Q16222 522 aaPredicted RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 ZNF658Q5TYW1 1059 aaPredicted RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 ARHGEF25Q86VW2 580 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 TUBGCP2Q9BSJ2 902 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 MAST3O60307 1309 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 MRRFQ96E11 262 aaKnown RBP15.4■□□□□ 0.06
SMC5-201ENST00000361138 CLTCL1P53675 1640 aa15.4■□□□□ 0.06
SMC5-201ENST00000361138 PLEKHG3A1L390 1219 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 PICALMQ13492 652 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 RETREG2Q8NC44 543 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 FERMT1Q9BQL6 677 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 SPATS2LQ9NUQ6 558 aaKnown RBP15.39■□□□□ 0.05
SMC5-201ENST00000361138 NHEJ1Q9H9Q4 299 aaPredicted RBP15.39■□□□□ 0.05
SMC5-201ENST00000361138 FAM184BQ9ULE4 1060 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 PDE8AO60658 829 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 HAUS3Q68CZ6 603 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 PTGDRQ13258 359 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 FAM169AQ9Y6X4 670 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 MROH5Q6ZUA9 1318 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 MOCS3O95396 460 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 ARID4AP29374 1257 aaPredicted RBP15.39■□□□□ 0.05
SMC5-201ENST00000361138 GGCXP38435 758 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 ZNF804AQ7Z570 1209 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 SRLQ86TD4 932 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 BLIDQ8IZY5 108 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 U2AF1L4Q8WU68 220 aaKnown RBP15.39■□□□□ 0.05
SMC5-201ENST00000361138 GBP5Q96PP8 586 aa15.39■□□□□ 0.05
SMC5-201ENST00000361138 TET3O43151 1660 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 NR1D1P20393 614 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 MMP1P03956 469 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 HERC4Q5GLZ8 1057 aaPredicted RBP15.38■□□□□ 0.05
SMC5-201ENST00000361138 FNBP4Q8N3X1 1017 aaPredicted RBP15.38■□□□□ 0.05
SMC5-201ENST00000361138 TADA3O75528 432 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 APOA5Q6Q788 366 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 C6orf229H3BNL8 230 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 KRT5P13647 590 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 POLR2FP61218 127 aaKnown RBP15.38■□□□□ 0.05
SMC5-201ENST00000361138 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
SMC5-201ENST00000361138 SLFN14P0C7P3 912 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 EHHADHQ08426 723 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 VPS52Q8N1B4 723 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 TRAF1Q13077 416 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 LRRC24Q50LG9 513 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 ALDH8A1Q9H2A2 487 aaPredicted RBP15.37■□□□□ 0.05
SMC5-201ENST00000361138 LDHBP07195 334 aaKnown RBP15.37■□□□□ 0.05
SMC5-201ENST00000361138 GPR108Q9NPR9 543 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 PHLDB2Q86SQ0 1253 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 NBPF5PQ86XG9 351 aaPredicted RBP15.37■□□□□ 0.05
SMC5-201ENST00000361138 MYOCDQ8IZQ8 938 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 SAP30BPQ9UHR5 308 aaKnown RBP15.37■□□□□ 0.05
SMC5-201ENST00000361138 SRPRBQ9Y5M8 271 aaKnown RBP15.37■□□□□ 0.05
SMC5-201ENST00000361138 IQSEC2Q5JU85 1478 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 CCDC169A6NNP5 214 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 ADCY7P51828 1080 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 SLC7A5Q01650 507 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 PAGE5Q96GU1 130 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 MLH3Q9UHC1 1453 aa15.37■□□□□ 0.05
SMC5-201ENST00000361138 PLCG2P16885 1265 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 MRPL12P52815 198 aaKnown RBP15.36■□□□□ 0.05
SMC5-201ENST00000361138 TCP11X2Q5H9J9 407 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 ANKRD13CQ8N6S4 541 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 PAF1Q8N7H5 531 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 VCX3BQ9H321 246 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 QRICH2Q9H0J4 1663 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 CXCR5P32302 372 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 PTPROQ16827 1216 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 MIPOL1Q8TD10 442 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 FAM114A2Q9NRY5 505 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 RNF14Q9UBS8 474 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms