RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 ADAMTS4O75173 837 aa17.99■□□□□ 0.47
GDPD3-201ENST00000360688 AKR1A1P14550 325 aa17.99■□□□□ 0.47
GDPD3-201ENST00000360688 SNRNP48Q6IEG0 339 aaKnown RBP17.99■□□□□ 0.47
GDPD3-201ENST00000360688 PRPF38AQ8NAV1 312 aaKnown RBP17.99■□□□□ 0.47
GDPD3-201ENST00000360688 LENG1Q96BZ8 264 aaPredicted RBP17.99■□□□□ 0.47
GDPD3-201ENST00000360688 EPB41L4AQ9HCS5 686 aaPredicted RBP17.99■□□□□ 0.47
GDPD3-201ENST00000360688 CNPY2Q9Y2B0 182 aa17.99■□□□□ 0.47
GDPD3-201ENST00000360688 TACC3Q9Y6A5 838 aa17.99■□□□□ 0.47
GDPD3-201ENST00000360688 IGKV6D-41A0A0C4DH26 115 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 A0A1W2PQ45 241 aaPredicted RBP17.98■□□□□ 0.47
GDPD3-201ENST00000360688 A0A1W2PQY0 241 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 CLTBP09497 229 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 ITGB8P26012 769 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 TSHZ3Q63HK5 1081 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 MSL3Q8N5Y2 521 aaKnown RBP17.98■□□□□ 0.47
GDPD3-201ENST00000360688 CLIP2Q9UDT6 1046 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 CDH23Q9H251 3354 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 DNAJC25-GNG10A0A024R161 153 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
GDPD3-201ENST00000360688 GPAA1O43292 621 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 SNAI1O95863 264 aaPredicted RBP17.98■□□□□ 0.47
GDPD3-201ENST00000360688 MAMDC4Q6UXC1 1216 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 GPATCH3Q96I76 525 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
GDPD3-201ENST00000360688 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 PQBP1O60828 265 aaKnown RBP17.97■□□□□ 0.47
GDPD3-201ENST00000360688 ZBED4O75132 1171 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 PRDM1O75626 825 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 ZFYP08048 801 aaPredicted RBP17.97■□□□□ 0.47
GDPD3-201ENST00000360688 GNAT2P19087 354 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 TDO2P48775 406 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 SMAD3P84022 425 aaKnown RBP17.97■□□□□ 0.47
GDPD3-201ENST00000360688 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.97■□□□□ 0.47
GDPD3-201ENST00000360688 CPXCR1Q8N123 301 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 MKL1Q969V6 931 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
GDPD3-201ENST00000360688 TSEN34Q9BSV6 310 aaKnown RBP17.97■□□□□ 0.47
GDPD3-201ENST00000360688 SEMA6BQ9H3T3 888 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 FAM184BQ9ULE4 1060 aa17.97■□□□□ 0.47
GDPD3-201ENST00000360688 M0R2C6 588 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 SLC4A3P48751 1232 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 ACLYP53396 1101 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 EPHB4P54760 987 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.96■□□□□ 0.46
GDPD3-201ENST00000360688 ZNF467Q7Z7K2 595 aaPredicted RBP17.96■□□□□ 0.46
GDPD3-201ENST00000360688 ZNF444Q8N0Y2 327 aaPredicted RBP17.96■□□□□ 0.46
GDPD3-201ENST00000360688 KLHDC9Q8NEP7 349 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 KIFC2Q96AC6 838 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 CEP95Q96GE4 821 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 SLC38A10Q9HBR0 1119 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 RAVER2Q9HCJ3 691 aaKnown RBP17.96■□□□□ 0.46
GDPD3-201ENST00000360688 MTMR4Q9NYA4 1195 aa17.96■□□□□ 0.46
GDPD3-201ENST00000360688 SYNRGQ9UMZ2 1314 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 VCANP13611 3396 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
GDPD3-201ENST00000360688 APPP05067 770 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 RAG1P15918 1043 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 CCSAPQ6IQ19 270 aaPredicted RBP17.95■□□□□ 0.46
GDPD3-201ENST00000360688 ANKRD33Q7Z3H0 272 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 IFNL3Q8IZI9 196 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 TOX2Q96NM4 488 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 TTYH1Q9H313 450 aaPredicted RBP17.95■□□□□ 0.46
GDPD3-201ENST00000360688 ZNF287Q9HBT7 754 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 STARD7Q9NQZ5 370 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 TMEM39AQ9NV64 488 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 FEM1BQ9UK73 627 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
GDPD3-201ENST00000360688 SYNPO2Q9UMS6 1093 aa17.95■□□□□ 0.46
GDPD3-201ENST00000360688 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
GDPD3-201ENST00000360688 TTLL1O95922 423 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 FAAP100Q0VG06 881 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 ACVR2BQ13705 512 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 KCNA10Q16322 511 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 GMCL1P1Q8NEA9 526 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 FGD4Q96M96 766 aa17.94■□□□□ 0.46
GDPD3-201ENST00000360688 COL25A1Q9BXS0 654 aaPredicted RBP17.94■□□□□ 0.46
GDPD3-201ENST00000360688 CTDP1Q9Y5B0 961 aaPredicted RBP17.94■□□□□ 0.46
GDPD3-201ENST00000360688 MYADML2A6NDP7 307 aa17.93■□□□□ 0.46
GDPD3-201ENST00000360688 IRX5P78411 483 aaPredicted RBP17.93■□□□□ 0.46
GDPD3-201ENST00000360688 LRRC47Q8N1G4 583 aaKnown RBP17.93■□□□□ 0.46
GDPD3-201ENST00000360688 ANKRD35Q8N283 1001 aa17.93■□□□□ 0.46
GDPD3-201ENST00000360688 CHST13Q8NET6 341 aa17.93■□□□□ 0.46
GDPD3-201ENST00000360688 NEDD1Q8NHV4 660 aa17.93■□□□□ 0.46
GDPD3-201ENST00000360688 RNPC3Q96LT9 517 aaKnown RBP17.93■□□□□ 0.46
GDPD3-201ENST00000360688 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
GDPD3-201ENST00000360688 ABHD16BQ9H3Z7 469 aa17.93■□□□□ 0.46
GDPD3-201ENST00000360688 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.93■□□□□ 0.46
GDPD3-201ENST00000360688 FBXO40Q9UH90 709 aa17.93■□□□□ 0.46
GDPD3-201ENST00000360688 PLIN4Q96Q06 1357 aa17.93■□□□□ 0.46
GDPD3-201ENST00000360688 DCDC2CA8MYV0 355 aa17.92■□□□□ 0.46
GDPD3-201ENST00000360688 ADCY6O43306 1168 aa17.92■□□□□ 0.46
GDPD3-201ENST00000360688 BMP3P12645 472 aa17.92■□□□□ 0.46
GDPD3-201ENST00000360688 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
GDPD3-201ENST00000360688 OAZ1P54368 228 aa17.92■□□□□ 0.46
GDPD3-201ENST00000360688 FPGSQ05932 587 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms