RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CUEDC1Q9NWM3 386 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-202ENST00000360642 G3BP2Q9UN86 482 aaKnown RBP8.53□□□□□ -1.04
CLCN3-202ENST00000360642 SALL1Q9NSC2 1324 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 M0R2C6 588 aa8.52□□□□□ -1.04
CLCN3-202ENST00000360642 PCCAP05165 728 aaPredicted RBP8.52□□□□□ -1.04
CLCN3-202ENST00000360642 CELA3AP09093 270 aa8.52□□□□□ -1.04
CLCN3-202ENST00000360642 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.04
CLCN3-202ENST00000360642 CCDC57Q2TAC2 916 aa8.52□□□□□ -1.04
CLCN3-202ENST00000360642 PGBD1Q96JS3 809 aa8.52□□□□□ -1.04
CLCN3-202ENST00000360642 TEX13AQ9BXU3 409 aaPredicted RBP8.52□□□□□ -1.04
CLCN3-202ENST00000360642 STRCQ7RTU9 1775 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 FOXP2O15409 715 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 EVCP57679 992 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 TEAD4Q15561 434 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 NAA16Q6N069 864 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-202ENST00000360642 ZNF746Q6NUN9 644 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-202ENST00000360642 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 ZBTB38Q8NAP3 1195 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-202ENST00000360642 SLC43A3Q8NBI5 491 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 OSBP2Q969R2 916 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 NUP62CLQ9H1M0 184 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 CHRDQ9H2X0 955 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 TLR3O15455 904 aaKnown RBP8.52□□□□□ -1.05
CLCN3-202ENST00000360642 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 PIGBQ92521 554 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 ZNF274Q96GC6 653 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-202ENST00000360642 STRN4Q9NRL3 753 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 DACT1Q9NYF0 836 aa8.52□□□□□ -1.05
CLCN3-202ENST00000360642 PTMAP06454 111 aaKnown RBP8.51□□□□□ -1.05
CLCN3-202ENST00000360642 ADORA1P30542 326 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 APOBRQ0VD83 1088 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 FBXW10Q5XX13 1052 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 FBXO27Q8NI29 283 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 DDX11Q96FC9 970 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 EAF1Q96JC9 268 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-202ENST00000360642 ZCCHC2Q9C0B9 1178 aaKnown RBP8.51□□□□□ -1.05
CLCN3-202ENST00000360642 DDX19AQ9NUU7 478 aaKnown RBP8.51□□□□□ -1.05
CLCN3-202ENST00000360642 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 NWD2Q9ULI1 1742 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 ABCC12Q96J65 1359 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 TARSP26639 723 aaKnown RBP8.51□□□□□ -1.05
CLCN3-202ENST00000360642 EVA1CP58658 441 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 HMGN5P82970 282 aaKnown RBP8.51□□□□□ -1.05
CLCN3-202ENST00000360642 POU4F2Q12837 409 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 CCDC158Q5M9N0 1113 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-202ENST00000360642 FILIP1Q7Z7B0 1213 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 DNAJC10Q8IXB1 793 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 FAM89AQ96GI7 184 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 CLSTN2Q9H4D0 955 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 CDHR2Q9BYE9 1310 aa8.51□□□□□ -1.05
CLCN3-202ENST00000360642 PPFIA3O75145 1194 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 ZFYP08048 801 aaPredicted RBP8.5□□□□□ -1.05
CLCN3-202ENST00000360642 PCSK2P16519 638 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 PDIA3P30101 505 aaKnown RBP8.5□□□□□ -1.05
CLCN3-202ENST00000360642 TYRO3Q06418 890 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 KIAA2012Q0VF49 1180 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 CAMK4Q16566 473 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 POTEAQ6S8J7 498 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 ANKLE1Q8NAG6 615 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 CFAP45Q9UL16 551 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 MAP3K15Q6ZN16 1313 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 NHSL1Q5SYE7 1610 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 MYH15Q9Y2K3 1946 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 PTPDC1A2A3K4 754 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 H3BQV1 296 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 TRIM37O94972 964 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 ATP4AP20648 1035 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 SCARF1Q14162 830 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 LRRFIP1Q32MZ4 808 aaKnown RBP8.5□□□□□ -1.05
CLCN3-202ENST00000360642 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 TTLL5Q6EMB2 1281 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 KIF6Q6ZMV9 814 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 FBF1Q8TES7 1133 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 TNMDQ9H2S6 317 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 RCOR1Q9UKL0 485 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 RIPOR2Q9Y4F9 1068 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 RIC1Q4ADV7 1423 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 GOLGA6L4A6NEF3 574 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 FGD1P98174 961 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 TTC39AQ5SRH9 613 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
CLCN3-202ENST00000360642 R3HCC1Q9Y3T6 440 aaKnown RBP8.5□□□□□ -1.05
CLCN3-202ENST00000360642 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.49□□□□□ -1.05
CLCN3-202ENST00000360642 ITGB4P16144 1822 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 hCG_2014768A0A024R1R8 64 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 STARD3NLO95772 234 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 IFIT5Q13325 482 aaKnown RBP8.49□□□□□ -1.05
CLCN3-202ENST00000360642 PTPROQ16827 1216 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 ERMP1Q7Z2K6 904 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 ZNF512BQ96KM6 892 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-202ENST00000360642 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-202ENST00000360642 CTNNA3Q9UI47 895 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
CLCN3-202ENST00000360642 ZNF335Q9H4Z2 1342 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-202ENST00000360642 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
CLCN3-202ENST00000360642 CCT2P78371 535 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms