RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 RASGRP4Q8TDF6 673 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 STAMQ92783 540 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 BLZF1Q9H2G9 400 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 DNAI1Q9UI46 699 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 RWDD2AQ9UIY3 292 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 AKR1B15C9JRZ8 316 aaPredicted RBP29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 ZNF397Q8NF99 534 aaPredicted RBP29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 FAM163AQ96GL9 167 aaPredicted RBP29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 PODXL2Q9NZ53 605 aa29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 GYS1P13807 737 aa29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 CDK8P49336 464 aa29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 ZNF658Q5TYW1 1059 aaPredicted RBP29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 DTHD1Q6ZMT9 781 aa29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 NEDD1Q8NHV4 660 aa29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 EYA3Q99504 573 aa29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 DISC1Q9NRI5 854 aa29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.83■■■□□ 2.37
CUEDC1-201ENST00000360238 FLT1P17948 1338 aa29.82■■■□□ 2.36
CUEDC1-201ENST00000360238 TEX33O43247 280 aa29.82■■■□□ 2.36
CUEDC1-201ENST00000360238 STAT6P42226 847 aa29.82■■■□□ 2.36
CUEDC1-201ENST00000360238 TBC1D22AQ8WUA7 517 aa29.82■■■□□ 2.36
CUEDC1-201ENST00000360238 GAKO14976 1311 aa29.82■■■□□ 2.36
CUEDC1-201ENST00000360238 BBOX1O75936 387 aa29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 RRAGBQ5VZM2 374 aa29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 CCDC12Q8WUD4 166 aaPredicted RBP29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 NAA15Q9BXJ9 866 aaKnown RBP29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 ITIH6Q6UXX5 1313 aa29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 RPN1P04843 607 aaKnown RBP29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 SERPINB2P05120 415 aa29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 PRPHP41219 470 aa29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 SPAG1Q07617 926 aa29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 PAK1Q13153 545 aa29.81■■■□□ 2.36
CUEDC1-201ENST00000360238 KLRF2D3W0D1 207 aa29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 ONECUT3O60422 494 aaPredicted RBP29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 ELF2Q15723 593 aa29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 PPFIBP1Q86W92 1011 aa29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 IGSF22Q8N9C0 903 aa29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 SRRTQ9BXP5 876 aaKnown RBP29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 LIMA1Q9UHB6 759 aaKnown RBP29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 MYL1P05976 194 aa29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 ZMYND12Q9H0C1 365 aa29.8■■■□□ 2.36
CUEDC1-201ENST00000360238 SMARCA1P28370 1054 aa29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 HOXA10P31260 410 aaPredicted RBP29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 RHBDL3P58872 404 aa29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 SEMA3FQ13275 785 aa29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 INF2Q27J81 1249 aa29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 MFSD14BQ5SR56 506 aa29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 TOGARAM2Q6ZUX3 1019 aa29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 V9GYY5 206 aaPredicted RBP29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 PARP1P09874 1014 aaKnown RBP29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 KARSQ15046 597 aaKnown RBP29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 CCSER1Q9C0I3 900 aa29.79■■■□□ 2.36
CUEDC1-201ENST00000360238 MYH8P13535 1937 aa29.78■■■□□ 2.36
CUEDC1-201ENST00000360238 LRRC10BA6NIK2 292 aa29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 NOVP48745 357 aa29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 KRT25Q7Z3Z0 450 aa29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 SMAP1Q8IYB5 467 aaPredicted RBP29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 TBC1D16Q8TBP0 767 aa29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 TMEM60Q9H2L4 133 aa29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 QSER1Q2KHR3 1735 aa29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 PLIN4Q96Q06 1357 aa29.77■■■□□ 2.36
CUEDC1-201ENST00000360238 MFAP3LO75121 409 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 GOLGA8HP0CJ92 632 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 NAALADL2Q58DX5 795 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 NELFBQ8WX92 580 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 CCDC51Q96ER9 411 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 CRAMP1Q96RY5 1269 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 MTMR7Q9Y216 660 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 FANCGO15287 622 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 NAPAP54920 295 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 RBL2Q08999 1139 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 KCNB1Q14721 858 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 KRT31Q15323 416 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 CNGA4Q8IV77 575 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 ANKRD20A12PQ8NF67 263 aa29.76■■■□□ 2.35
CUEDC1-201ENST00000360238 CDC25AP30304 524 aa29.75■■■□□ 2.35
CUEDC1-201ENST00000360238 UBA7P41226 1012 aa29.75■■■□□ 2.35
CUEDC1-201ENST00000360238 RRP36Q96EU6 259 aaKnown RBP29.75■■■□□ 2.35
CUEDC1-201ENST00000360238 MAGEF1Q9HAY2 307 aa29.75■■■□□ 2.35
CUEDC1-201ENST00000360238 POLLQ9UGP5 575 aa29.75■■■□□ 2.35
CUEDC1-201ENST00000360238 PARP3Q9Y6F1 533 aa29.75■■■□□ 2.35
CUEDC1-201ENST00000360238 GNA11P29992 359 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 KMT5BQ4FZB7 885 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 TMC4Q7Z404 712 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 AK8Q96MA6 479 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 CUEDC2Q9H467 287 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 C6orf50Q9HD87 102 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 OGFRQ9NZT2 677 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 CCDC175P0C221 793 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 SLC27A3Q5K4L6 730 aa29.74■■■□□ 2.35
CUEDC1-201ENST00000360238 FECHP22830 423 aa29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 CBX1P83916 185 aa29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 SEPT12Q8IYM1 358 aa29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 RASSF8Q8NHQ8 419 aa29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 CEP95Q96GE4 821 aa29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 SEC63Q9UGP8 760 aaKnown RBP29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 DDX41Q9UJV9 622 aaKnown RBP29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 TPM1P09493 284 aa29.73■■■□□ 2.35
CUEDC1-201ENST00000360238 NONOQ15233 471 aaKnown RBP eCLIP29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms