RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 USP17L4A6NCW7 530 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 PES1O00541 588 aaKnown RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 KIF5CO60282 957 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 RPN1P04843 607 aaKnown RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 ORC2Q13416 577 aaPredicted RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 USP17L1Q7RTZ2 530 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 GJD4Q96KN9 370 aaPredicted RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 TMEM47Q9BQJ4 181 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 TMX1Q9H3N1 280 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 BAZ2AQ9UIF9 1905 aaKnown RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 NR1I3Q14994 352 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 TMEM266Q2M3C6 531 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 NEDD1Q8NHV4 660 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 ZNF526Q8TF50 670 aaPredicted RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 NOC3LQ8WTT2 800 aaKnown RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 CALML4Q96GE6 196 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 CDK5RAP3Q96JB5 506 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 BLZF1Q9H2G9 400 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 DISC1Q9NRI5 854 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 OGFRQ9NZT2 677 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 MYH13Q9UKX3 1938 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 H7C1D1 291 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 SMARCA1P28370 1054 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 PRPHP41219 470 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 CDK8P49336 464 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 ADKP55263 362 aaKnown RBP10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 GPSM2P81274 684 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 FAM114A1Q8IWE2 563 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 NELFBQ8WX92 580 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 L2HGDHQ9H9P8 463 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 CCDC88AQ3V6T2 1871 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 GPR75-ASB3A0A0A6YYF3 556 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 TBX2Q13207 712 aaPredicted RBP10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 INF2Q27J81 1249 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 C16orf86Q6ZW13 317 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 SMAP1Q8IYB5 467 aaPredicted RBP10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 CERKQ8TCT0 537 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 NUP88Q99567 741 aaPredicted RBP10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 MAD2L2Q9UI95 211 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 RASA1P20936 1047 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 CUL4BQ13620 913 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 NPY5RQ15761 445 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 ARHGAP29Q52LW3 1261 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 SLC27A3Q5K4L6 730 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 STAG2Q8N3U4 1231 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 STAMQ92783 540 aa10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 RTFDC1Q9BY42 306 aaPredicted RBP10.49□□□□□ -0.73
GTF3C2-202ENST00000359541 BICDL2A1A5D9 508 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 MARCH6O60337 910 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 IPO7O95373 1038 aaKnown RBP10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 OR52Z1P0C646 297 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 FAM182BQ5T319 152 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 PTF1AQ7RTS3 328 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 CPLX3Q8WVH0 158 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 IL17RBQ9NRM6 502 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 EXOC1Q9NV70 894 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 TRPC5Q9UL62 973 aaPredicted RBP10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 COL24A1Q17RW2 1714 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 A0A087X0B3 334 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 IL1R1P14778 569 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 CBX1P83916 185 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 ELF2Q15723 593 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 NEK8Q86SG6 692 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 TMTC1Q8IUR5 882 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 TC2NQ8N9U0 490 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 TRIM47Q96LD4 638 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 LRRC27Q9C0I9 530 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 SUGT1Q9Y2Z0 365 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 ITIH6Q6UXX5 1313 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 HLA-DOAP06340 250 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 KARSQ15046 597 aaKnown RBP10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 E2F4Q16254 413 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 LETM2Q2VYF4 491 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 CDKAL1Q5VV42 579 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 REXO1Q8N1G1 1221 aaKnown RBP10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 RASGRP4Q8TDF6 673 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 CRAMP1Q96RY5 1269 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 CCSER1Q9C0I3 900 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 PCDHA6Q9UN73 950 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 TTF2Q9UNY4 1162 aaKnown RBP10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 PCDHA8Q9Y5H6 950 aa10.48□□□□□ -0.73
GTF3C2-202ENST00000359541 PPP1R3GB7ZBB8 358 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 STXBP3O00186 592 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 CCNT1O60563 726 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 TUBB2AQ13885 445 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 KCNB1Q14721 858 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 ASPRV1Q53RT3 343 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 PDXDC2PQ6P474 469 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 CABP7Q86V35 215 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 SMYD4Q8IYR2 804 aaPredicted RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 TUBB2BQ9BVA1 445 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 ZC3H12CQ9C0D7 883 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 ADD3Q9UEY8 706 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 A0A1B0GUL6 1792 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 LAMB1P07942 1786 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 KCNJ18B7U540 433 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms