RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 USP6NLQ92738 828 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 NEUROD6Q96NK8 337 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 NOL10Q9BSC4 688 aaKnown RBP7.77□□□□□ -1.17
CCDC196-201ENST00000359454 PRKD2Q9BZL6 878 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 API5Q9BZZ5 524 aaKnown RBP7.77□□□□□ -1.17
CCDC196-201ENST00000359454 RAI14Q9P0K7 980 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 RBPJLQ9UBG7 517 aa7.77□□□□□ -1.17
CCDC196-201ENST00000359454 PLXNB2O15031 1838 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 BAG3O95817 575 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 CCND3P30281 292 aaPredicted RBP7.76□□□□□ -1.17
CCDC196-201ENST00000359454 ERVK-9P63128 1117 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 ERVK-24P63145 666 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 LRRC26Q2I0M4 334 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 TBC1D9Q6ZT07 1266 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 PLEKHH3Q7Z736 793 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 FOXP4Q8IVH2 680 aaPredicted RBP7.76□□□□□ -1.17
CCDC196-201ENST00000359454 ADAM32Q8TC27 787 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 SH3RF3Q8TEJ3 882 aaPredicted RBP7.76□□□□□ -1.17
CCDC196-201ENST00000359454 APBA2Q99767 749 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 LBHD1Q9BQE6 289 aaPredicted RBP7.76□□□□□ -1.17
CCDC196-201ENST00000359454 COL25A1Q9BXS0 654 aaPredicted RBP7.76□□□□□ -1.17
CCDC196-201ENST00000359454 CWC22Q9HCG8 908 aaKnown RBP7.76□□□□□ -1.17
CCDC196-201ENST00000359454 TXNRD2Q9NNW7 524 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 LRP2BPQ9P2M1 347 aa7.76□□□□□ -1.17
CCDC196-201ENST00000359454 NOB1Q9ULX3 412 aaKnown RBP7.76□□□□□ -1.17
CCDC196-201ENST00000359454 ATAD5Q96QE3 1844 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L10C9JJH3 530 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 CCER2I3L3R5 266 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 SRGAP3O43295 1099 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 PEX10O60683 326 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 GLRX3O76003 335 aaKnown RBP7.75□□□□□ -1.17
CCDC196-201ENST00000359454 GNAI3P08754 354 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 CT47B1P0C2W7 299 aaPredicted RBP7.75□□□□□ -1.17
CCDC196-201ENST00000359454 UQCRFS1P1P0C7P4 283 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 ARID4AP29374 1257 aaPredicted RBP7.75□□□□□ -1.17
CCDC196-201ENST00000359454 SOX11P35716 441 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 MTX1Q13505 466 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 CCL14Q16627 93 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 MFSD14CQ5VZR4 134 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 PI16Q6UXB8 463 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 GPR142Q7Z601 462 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 METTL16Q86W50 562 aaKnown RBP7.75□□□□□ -1.17
CCDC196-201ENST00000359454 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC196-201ENST00000359454 CRACR2BQ8N4Y2 399 aaPredicted RBP7.75□□□□□ -1.17
CCDC196-201ENST00000359454 EHBP1Q8NDI1 1231 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 MEIS3Q99687 375 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 PAGR1Q9BTK6 254 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 PORCNQ9H237 461 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 ZBTB21Q9ULJ3 1066 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 PCDHB9Q9Y5E1 797 aa7.75□□□□□ -1.17
CCDC196-201ENST00000359454 V9GY48 417 aaPredicted RBP7.75□□□□□ -1.17
CCDC196-201ENST00000359454 MSCO60682 206 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 IGSF3O75054 1194 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 GDF11O95390 407 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 DEKP35659 375 aaKnown RBP7.74□□□□□ -1.17
CCDC196-201ENST00000359454 MCAMP43121 646 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 CCNA1P78396 465 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 JAG1P78504 1218 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 RBM10P98175 930 aaKnown RBP7.74□□□□□ -1.17
CCDC196-201ENST00000359454 SEMA3FQ13275 785 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 NAA16Q6N069 864 aaPredicted RBP7.74□□□□□ -1.17
CCDC196-201ENST00000359454 ATF7IPQ6VMQ6 1270 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 MAPKAPK5Q8IW41 473 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 TGFBRAP1Q8WUH2 860 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 ZNF592Q92610 1267 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 GLMNQ92990 594 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 EDC3Q96F86 508 aaKnown RBP7.74□□□□□ -1.17
CCDC196-201ENST00000359454 GUCD1Q96NT3 240 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 SENP6Q9GZR1 1112 aaPredicted RBP7.74□□□□□ -1.17
CCDC196-201ENST00000359454 DNAJC18Q9H819 358 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 AATFQ9NY61 560 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC196-201ENST00000359454 PRKAG2Q9UGJ0 569 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 RABGAP1Q9Y3P9 1069 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 SZT2Q5T011 3432 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 FLT1P17948 1338 aa7.74□□□□□ -1.17
CCDC196-201ENST00000359454 SLC15A5A6NIM6 579 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L15C9J2P7 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L13C9JLJ4 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L11C9JVI0 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L18D6R9N7 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L22D6RA61 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L17D6RBQ6 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L19D6RCP7 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L20D6RJB6 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 HLA-DOAP06340 250 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 VARSP26640 1264 aaKnown RBP7.73□□□□□ -1.17
CCDC196-201ENST00000359454 USP17L24Q0WX57 530 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 G3BP1Q13283 466 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC196-201ENST00000359454 ZNF697Q5TEC3 545 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 ZNF598Q86UK7 904 aaKnown RBP7.73□□□□□ -1.17
CCDC196-201ENST00000359454 TRMT2AQ8IZ69 625 aaKnown RBP7.73□□□□□ -1.17
CCDC196-201ENST00000359454 FAM174AQ8TBP5 190 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 LPAR1Q92633 364 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 CALR3Q96L12 384 aaKnown RBP7.73□□□□□ -1.17
CCDC196-201ENST00000359454 C12orf42Q96LP6 360 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 C1QTNF2Q9BXJ5 285 aa7.73□□□□□ -1.17
CCDC196-201ENST00000359454 DDX20Q9UHI6 824 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms