RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 BAG2O95816 211 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 MYOCDQ8IZQ8 938 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 SYNJ2BP-COX16A0A087WUM0 186 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 TNNC2P02585 160 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 PDE6CP51160 858 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 ZSCAN10Q96SZ4 725 aaPredicted RBP20.2■□□□□ 0.82
SHANK1-202ENST00000359082 COX16Q9P0S2 106 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 ANKFY1Q9P2R3 1169 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 TCIRG1Q13488 830 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 RBBP5Q15291 538 aaKnown RBP20.2■□□□□ 0.82
SHANK1-202ENST00000359082 FAM98CQ17RN3 349 aaKnown RBP20.2■□□□□ 0.82
SHANK1-202ENST00000359082 SHANK2Q9UPX8 1470 aa20.19■□□□□ 0.82
SHANK1-202ENST00000359082 PPP2R5BQ15173 497 aa20.19■□□□□ 0.82
SHANK1-202ENST00000359082 RIC8AQ9NPQ8 531 aa20.19■□□□□ 0.82
SHANK1-202ENST00000359082 ME3Q16798 604 aa20.19■□□□□ 0.82
SHANK1-202ENST00000359082 UHMK1Q8TAS1 419 aaKnown RBP20.19■□□□□ 0.82
SHANK1-202ENST00000359082 PLCB4Q15147 1175 aa20.19■□□□□ 0.82
SHANK1-202ENST00000359082 HADHQ16836 314 aaKnown RBP20.19■□□□□ 0.82
SHANK1-202ENST00000359082 GTF2IP78347 998 aa20.19■□□□□ 0.82
SHANK1-202ENST00000359082 EP400NLQ6ZTU2 488 aa20.19■□□□□ 0.82
SHANK1-202ENST00000359082 DACT3Q96B18 629 aaPredicted RBP20.19■□□□□ 0.82
SHANK1-202ENST00000359082 KRT3P12035 628 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 XKR9Q5GH70 373 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 ZNF654Q8IZM8 581 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 ATP1A2P50993 1020 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 NME8Q8N427 588 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 PPFIA4O75335 1185 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 GSTA1P08263 222 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 GSTA2P09210 222 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 ALAS1P13196 640 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 KIF11P52732 1056 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 DSCC1Q9BVC3 393 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 HSPA2P54652 639 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 PPP2R5AQ15172 486 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 LRRC47Q8N1G4 583 aaKnown RBP20.18■□□□□ 0.82
SHANK1-202ENST00000359082 PSTPIP2Q9H939 334 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 THRAP3Q9Y2W1 955 aaKnown RBP20.18■□□□□ 0.82
SHANK1-202ENST00000359082 TCP10L2B9ZVM9 353 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 PPIP5K2O43314 1243 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 RASSF2P50749 326 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 PPME1Q9Y570 386 aa20.18■□□□□ 0.82
SHANK1-202ENST00000359082 BLIDQ8IZY5 108 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 TRIM58Q8NG06 486 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 GPKOWQ92917 476 aaPredicted RBP eCLIP20.17■□□□□ 0.82
SHANK1-202ENST00000359082 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 DDX25Q9UHL0 483 aaKnown RBP20.17■□□□□ 0.82
SHANK1-202ENST00000359082 DLATP10515 647 aaKnown RBP20.17■□□□□ 0.82
SHANK1-202ENST00000359082 HVCN1Q96D96 273 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 ATP8A2Q9NTI2 1148 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 BCAP29Q9UHQ4 241 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 WDR62O43379 1518 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 GOLGA8KD6RF30 607 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 GOLGA8HP0CJ92 632 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 IL13P35225 146 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 POLR2FP61218 127 aaKnown RBP20.17■□□□□ 0.82
SHANK1-202ENST00000359082 NOP9Q86U38 636 aaKnown RBP20.17■□□□□ 0.82
SHANK1-202ENST00000359082 GBP5Q96PP8 586 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
SHANK1-202ENST00000359082 THAP12O43422 761 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 SESN3P58005 492 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 GADL1Q6ZQY3 521 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 ZBTB8OSQ8IWT0 167 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 EDC3Q96F86 508 aaKnown RBP20.17■□□□□ 0.82
SHANK1-202ENST00000359082 HYOU1Q9Y4L1 999 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 OPHN1O60890 802 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 WHAMMP3Q1A5X7 153 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 C1orf112Q9NSG2 853 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 KLHL14Q9P2G3 628 aa20.17■□□□□ 0.82
SHANK1-202ENST00000359082 PALM3A6NDB9 673 aaPredicted RBP20.16■□□□□ 0.82
SHANK1-202ENST00000359082 AS3MTQ9HBK9 375 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 SBNO1A3KN83 1393 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 ZNF445P59923 1031 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 PIK3CAP42336 1068 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 GNPTABQ3T906 1256 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 CAPN7Q9Y6W3 813 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 NR1I2O75469 434 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 CNGA1P29973 690 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 JADE1Q6IE81 842 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 HINFPQ9BQA5 517 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 SKA2Q8WVK7 121 aaPredicted RBP20.16■□□□□ 0.82
SHANK1-202ENST00000359082 POMGNT1Q8WZA1 660 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 TEKT1Q969V4 418 aa20.16■□□□□ 0.82
SHANK1-202ENST00000359082 COBLO75128 1261 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 POLR2MP0CAP2 368 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 CTSWP56202 376 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 SDR42E1Q8WUS8 393 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 ZBTB24O43167 697 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-202ENST00000359082 KCNA6P17658 529 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 TSTA3Q13630 321 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-202ENST00000359082 IQCDQ96DY2 449 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 IGBP1P78318 339 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 CCDC51Q96ER9 411 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 ATF2P15336 505 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 CASP2P42575 452 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 SLC39A2Q9NP94 309 aa20.15■□□□□ 0.82
SHANK1-202ENST00000359082 TTC19Q6DKK2 380 aaPredicted RBP20.14■□□□□ 0.82
SHANK1-202ENST00000359082 DNAJC10Q8IXB1 793 aa20.14■□□□□ 0.82
SHANK1-202ENST00000359082 SLFN12Q8IYM2 578 aa20.14■□□□□ 0.82
SHANK1-202ENST00000359082 CHURC1Q8WUH1 139 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms