RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ZNF569Q5MCW4 686 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 C12orf60Q5U649 245 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 CC2D1AQ6P1N0 951 aaPredicted RBP9.69□□□□□ -0.86
RFX3-202ENST00000358730 HEATR3Q7Z4Q2 680 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 C4orf32Q8N8J7 132 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 MKNK2Q9HBH9 465 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 SH3GLB2Q9NR46 395 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 NARFQ9UHQ1 456 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 TTF2Q9UNY4 1162 aaKnown RBP9.69□□□□□ -0.86
RFX3-202ENST00000358730 SBF2Q86WG5 1849 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 MYH1P12882 1939 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 PP2D1A8MPX8 630 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 CHMP4BP1P59074 171 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 ERVK-24P63145 666 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 TRIM14Q14142 442 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 GRM4Q14833 912 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
RFX3-202ENST00000358730 WWC2Q6AWC2 1192 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 DTHD1Q6ZMT9 781 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 DGKHQ86XP1 1220 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 TMTC1Q8IUR5 882 aa9.69□□□□□ -0.86
RFX3-202ENST00000358730 SH3RF3Q8TEJ3 882 aaPredicted RBP9.69□□□□□ -0.86
RFX3-202ENST00000358730 TRIM49BA6NDI0 452 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 LRRC10BA6NIK2 292 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 GNPATO15228 680 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 ZPR1O75312 459 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 LDHBP07195 334 aaKnown RBP9.68□□□□□ -0.86
RFX3-202ENST00000358730 TSPY3P0CV98 308 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 TSPY8P0CW00 308 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 FECHP22830 423 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 UBXN1Q04323 297 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 INF2Q27J81 1249 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 TMED8Q6PL24 325 aaPredicted RBP9.68□□□□□ -0.86
RFX3-202ENST00000358730 AMOTL1Q8IY63 956 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 CCDC148Q8NFR7 591 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 PARD6BQ9BYG5 372 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 ARFGAP3Q9NP61 516 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
RFX3-202ENST00000358730 MAD2L2Q9UI95 211 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 TNRC6CQ9HCJ0 1690 aaKnown RBP9.68□□□□□ -0.86
RFX3-202ENST00000358730 CTAGE9A4FU28 777 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 PES1O00541 588 aaKnown RBP9.68□□□□□ -0.86
RFX3-202ENST00000358730 RGL2O15211 777 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 TBC1D8O95759 1140 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 KRT9P35527 623 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 GNAQP50148 359 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 CYP26C1Q6V0L0 522 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 TPTE2Q6XPS3 522 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 SRGAP1Q7Z6B7 1085 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 SLC44A5Q8NCS7 719 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 TMEM60Q9H2L4 133 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 ANKIB1Q9P2G1 1089 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 CDC23Q9UJX2 597 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 STX8Q9UNK0 236 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 ROBO3Q96MS0 1386 aa9.68□□□□□ -0.86
RFX3-202ENST00000358730 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
RFX3-202ENST00000358730 SASH3O75995 380 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 UBA7P41226 1012 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 NAALADL2Q58DX5 795 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 SLC51AQ86UW1 340 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 SLC35F6Q8N357 371 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 PLIN2Q99541 437 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 MKRN1Q9UHC7 482 aaKnown RBP9.67□□□□□ -0.86
RFX3-202ENST00000358730 PCDHA6Q9UN73 950 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 PCDHA8Q9Y5H6 950 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 M0R2N6 131 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 ATP8B1O43520 1251 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 CYTH3O43739 400 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 PARP1P09874 1014 aaKnown RBP9.67□□□□□ -0.86
RFX3-202ENST00000358730 KCNA4P22459 653 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 SLC35G1Q2M3R5 365 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 PTF1AQ7RTS3 328 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 ADSSL1Q8N142 457 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 CEP112Q8N8E3 955 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 TGFBRAP1Q8WUH2 860 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 TRIM47Q96LD4 638 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 IRS2Q9Y4H2 1338 aa9.67□□□□□ -0.86
RFX3-202ENST00000358730 H7C1D1 291 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 STXBP3O00186 592 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 POLR3GO15318 223 aaPredicted RBP9.66□□□□□ -0.86
RFX3-202ENST00000358730 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 PMS1P54277 932 aaKnown RBP9.66□□□□□ -0.86
RFX3-202ENST00000358730 STIM1Q13586 685 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 ZNF444Q8N0Y2 327 aaPredicted RBP9.66□□□□□ -0.86
RFX3-202ENST00000358730 DAGLBQ8NCG7 672 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 WDR66Q8TBY9 1149 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 ANKS1AQ92625 1134 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 BARHL2Q9NY43 387 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 SAP30BPQ9UHR5 308 aaKnown RBP9.66□□□□□ -0.86
RFX3-202ENST00000358730 ERICH4A6NGS2 130 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 PSMA7O14818 248 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 BAG3O95817 575 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 ABL1P00519 1130 aa9.66□□□□□ -0.86
RFX3-202ENST00000358730 GOLGA8HP0CJ92 632 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms