RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ENAHQ8N8S7 591 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 HAUS4Q9H6D7 363 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 KCND1Q9NSA2 647 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 LRRIQ3A6PVS8 624 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 HPDP32754 393 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 GGCXP38435 758 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 ATP6V1AP38606 617 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 NOP2P46087 812 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 NAPAP54920 295 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 GNGT1P63211 74 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 ANKRD18AQ8IVF6 992 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 TUBGCP2Q9BSJ2 902 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 CRNKL1Q9BZJ0 848 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 SLC39A2Q9NP94 309 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 SMARCAL1Q9NZC9 954 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 LRWD1Q9UFC0 647 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 SAP30BPQ9UHR5 308 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 SETD1AO15047 1707 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 GOLGA6L10A6NI86 522 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 EIF3CLB5ME19 914 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 NDUFAB1O14561 156 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 CLSTN1O94985 981 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 SCG2P13521 617 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 TXKP42681 527 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 KLK7P49862 253 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 HSPA2P54652 639 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 CHRNDQ07001 517 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 TRIM14Q14142 442 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 RRAGAQ7L523 313 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 RASGRP2Q7LDG7 609 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 HPS3Q969F9 1004 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 EIF3CQ99613 913 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 IFIH1Q9BYX4 1025 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 RBM28Q9NW13 759 aaKnown RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 TBC1D7Q9P0N9 293 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 FBXO3Q9UK99 471 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 MROH5Q6ZUA9 1318 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 TMCO5BA8MYB1 307 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 EXOC5O00471 708 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CCNT1O60563 726 aaKnown RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 TSPY3P0CV98 308 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 TSPY8P0CW00 308 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CYP2D6P10635 497 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 MDM2Q00987 491 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 TUBB2AQ13885 445 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CALML4Q96GE6 196 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 TUBB2BQ9BVA1 445 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 UBA5Q9GZZ9 404 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 AGPAT5Q9NUQ2 364 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 DUSP10Q9Y6W6 482 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 PPP1R3GB7ZBB8 358 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 WNT7AO00755 349 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 MOCS3O95396 460 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CALM1P0DP23 149 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CALM2P0DP24 149 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CALM3P0DP25 149 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 MAGEA1P43355 309 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 TFAP4Q01664 338 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 DPYDQ12882 1025 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 C8orf74Q6P047 294 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 ZNF579Q8NAF0 562 aaKnown RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 WDR19Q8NEZ3 1342 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 TAF4BQ92750 862 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 STK36Q9NRP7 1315 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 BTG4Q9NY30 223 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 L1RE1Q9UN81 338 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 RGPD2P0DJD1 1756 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 UBR1Q8IWV7 1749 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 H7C1D1 291 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 RNF225M0QZC1 329 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CALML3P27482 149 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 TECP42680 631 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 ZNF658Q5TYW1 1059 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 SPTY2D1Q68D10 685 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 BLIDQ8IZY5 108 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 STAG1Q8WVM7 1258 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 CNOT6LQ96LI5 555 aaKnown RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 MED15Q96RN5 788 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 NHEJ1Q9H9Q4 299 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 MED4Q9NPJ6 270 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 SEC63Q9UGP8 760 aaKnown RBP7.34□□□□□ -1.23
CSDE1-203ENST00000358528 RWDD2AQ9UIY3 292 aa7.34□□□□□ -1.23
CSDE1-203ENST00000358528 LTN1O94822 1766 aa7.34□□□□□ -1.24
CSDE1-203ENST00000358528 TUBBP07437 444 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 KCNQ4P56696 695 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 TUBB4BP68371 445 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 SUSD4Q5VX71 490 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 FAM114A1Q8IWE2 563 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 KLHL7Q8IXQ5 586 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 MB21D1Q8N884 522 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 PYM1Q9BRP8 204 aaKnown RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 SELENOOQ9BVL4 669 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 MLXIPQ9HAP2 919 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 SEPT11Q9NVA2 429 aaKnown RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 MKRN1Q9UHC7 482 aaKnown RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 NUTM2BA6NNL0 878 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 NUTM2EB1AL46 878 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 ARID4AP29374 1257 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 CFAP58Q5T655 872 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms