RNA–Protein interactions for RNA: ENST00000358394.7

CEACAM1-204, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-204ENST00000358394 REPS2Q8NFH8 660 aa10.7□□□□□ -0.7
CEACAM1-204ENST00000358394 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
CEACAM1-204ENST00000358394 ZNF214Q9UL59 606 aaPredicted RBP10.7□□□□□ -0.7
CEACAM1-204ENST00000358394 DIS3Q9Y2L1 958 aaKnown RBP10.7□□□□□ -0.7
CEACAM1-204ENST00000358394 MYH4Q9Y623 1939 aa10.7□□□□□ -0.7
CEACAM1-204ENST00000358394 CLTBP09497 229 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 ZNF865P0CJ78 1059 aaPredicted RBP10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 AKR1A1P14550 325 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 COPB2P35606 906 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 STK11IPQ8N1F8 1099 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 LENG1Q96BZ8 264 aaPredicted RBP10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 NUP88Q99567 741 aaPredicted RBP10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 SLF1Q9BQI6 1058 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 LRRCC1Q9C099 1032 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 CHMP4BQ9H444 224 aaKnown RBP10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 ARPP21Q9UBL0 812 aaPredicted RBP10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 MCM3APO60318 1980 aa10.69□□□□□ -0.7
CEACAM1-204ENST00000358394 CDH23Q9H251 3354 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 ROBO3Q96MS0 1386 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 A0A1W2PQ45 241 aaPredicted RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 A0A1W2PQY0 241 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 SMARCA5O60264 1052 aaPredicted RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 PQBP1O60828 265 aaKnown RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 ITGB8P26012 769 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 SMAD3P84022 425 aaKnown RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 SNRNP48Q6IEG0 339 aaKnown RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 STRBPQ96SI9 672 aaKnown RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 MKNK2Q9HBH9 465 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 GSG1L2A8MUP6 293 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 MINDY4BA8MYZ0 360 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 F5H6K3 240 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 ADAMTS4O75173 837 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 RAG1P15918 1043 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 RASA1P20936 1047 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 KLRC3Q07444 240 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 SBK1Q52WX2 424 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 MAFAQ8NHW3 353 aaPredicted RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 RNPC3Q96LT9 517 aaKnown RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 TEX13BQ9BXU2 312 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 TTYH1Q9H313 450 aaPredicted RBP10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 NYAP2Q9P242 653 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 RIPK3Q9Y572 518 aa10.68□□□□□ -0.7
CEACAM1-204ENST00000358394 KIAA0355O15063 1070 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 SNAI1O95863 264 aaPredicted RBP10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 NDUFB10O96000 172 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 ACLYP53396 1101 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 EPHB4P54760 987 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 DIEXFQ68CQ4 756 aaKnown RBP10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 CPXCR1Q8N123 301 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 MSL3Q8N5Y2 521 aaKnown RBP10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 PRPF38AQ8NAV1 312 aaKnown RBP10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 MYLIPQ8WY64 445 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 TSEN34Q9BSV6 310 aaKnown RBP10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 STARD7Q9NQZ5 370 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 ECHDC1Q9NTX5 307 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 TMEM39AQ9NV64 488 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 FAM184BQ9ULE4 1060 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 CTDP1Q9Y5B0 961 aaPredicted RBP10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 PRUNE2Q8WUY3 3088 aa10.67□□□□□ -0.7
CEACAM1-204ENST00000358394 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 DNAJC25-GNG10A0A024R161 153 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 DCDC2CA8MYV0 355 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 ZBED4O75132 1171 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 FPGSQ05932 587 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 FAAP100Q0VG06 881 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 NBR1Q14596 966 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 KCNA10Q16322 511 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 GIMAP6Q6P9H5 292 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 MAMDC4Q6UXC1 1216 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 ANKRD33Q7Z3H0 272 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 KBTBD3Q8NAB2 608 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 KLHDC9Q8NEP7 349 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 NUP133Q8WUM0 1156 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 OSBP2Q969R2 916 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 KIFC2Q96AC6 838 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 CLIP2Q9UDT6 1046 aa10.66□□□□□ -0.7
CEACAM1-204ENST00000358394 MUC3AQ02505 3323 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 MOXD2PA6NHM9 499 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 ATP2A1O14983 1001 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 RNF113AO15541 343 aaKnown RBP10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 PRDM1O75626 825 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 APPP05067 770 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 C20orf194Q5TEA3 1177 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 APPBP2Q92624 585 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 RAVER2Q9HCJ3 691 aaKnown RBP10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 RCAN3Q9UKA8 241 aa10.65□□□□□ -0.7
CEACAM1-204ENST00000358394 IGKV6D-41A0A0C4DH26 115 aa10.64□□□□□ -0.71
CEACAM1-204ENST00000358394 GPAA1O43292 621 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms