RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 LLGL1Q15334 1064 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 TCP11Q8WWU5 503 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 TMEM87BQ96K49 555 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 G3BP2Q9UN86 482 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 NR1I2O75469 434 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 LUC7L3O95232 432 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 POLR2FP61218 127 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 YWHAGP61981 247 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 MYSM1Q5VVJ2 828 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 EEF2KMTQ96G04 330 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 SOS1Q07889 1333 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 STAT1P42224 750 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 GUCY2DQ02846 1103 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 TRMT10CQ7L0Y3 403 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 SCAF11Q99590 1463 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 GSTA4O15217 222 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 SLC1A4P43007 532 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 GDAP1Q8TB36 358 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 CCDC138Q96M89 665 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 NVLO15381 856 aaKnown RBP12.26□□□□□ -0.45
COL11A1-202ENST00000358392 ANKRD35Q8N283 1001 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 PARD3BQ8TEW8 1205 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 MRFAP1L1Q96HT8 127 aa12.26□□□□□ -0.45
COL11A1-202ENST00000358392 SFMBT1Q9UHJ3 866 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 PPP2R2CQ9Y2T4 447 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 HYOU1Q9Y4L1 999 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 KDM2BQ8NHM5 1336 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 H7C0C1 242 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ENC1O14682 589 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ATP5OP48047 213 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 TRIM58Q8NG06 486 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 TGFBRAP1Q8WUH2 860 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 SUFUQ9UMX1 484 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 FNDC3AQ9Y2H6 1198 aaKnown RBP12.25□□□□□ -0.45
COL11A1-202ENST00000358392 SLC4A7Q9Y6M7 1214 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 NSD2O96028 1365 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 KRT40Q6A162 431 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 MAPKAPK5Q8IW41 473 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 FGD4Q96M96 766 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 CCDC68Q9H2F9 335 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ORC6Q9Y5N6 252 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 IVNS1ABPQ9Y6Y0 642 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 PPIP5K1Q6PFW1 1433 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 P4HA1P13674 534 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ASPHQ12797 758 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ZNF148Q9UQR1 794 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 POLD1P28340 1107 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 PDE6CP51160 858 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ANKRD20A4Q4UJ75 823 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ANKRD20A2Q5SQ80 823 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ANKRD20A1Q5TYW2 823 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 PANK4Q9NVE7 773 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 TESPA1A2RU30 521 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-202ENST00000358392 WDR91A4D1P6 747 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 S100BP04271 92 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-202ENST00000358392 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 DBNDD2Q9BQY9 259 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 ANGPTL3Q9Y5C1 460 aa12.25□□□□□ -0.45
COL11A1-202ENST00000358392 GNPATO15228 680 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 BFSP1Q12934 665 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 DDB1Q16531 1140 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 DEPTORQ8TB45 409 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 ZNF653Q96CK0 615 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 EYA3Q99504 573 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 K7ENM7 598 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 ZBTB17Q13105 803 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 RFX6Q8HWS3 928 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 TBK1Q9UHD2 729 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 INPP5FQ9Y2H2 1132 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 HNRNPCL2B2RXH8 293 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 HNRNPCL1O60812 293 aaKnown RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 KRT10P13645 584 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 GARSP41250 739 aaKnown RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 RASSF7Q02833 373 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 TMED2Q15363 201 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 HADHQ16836 314 aaKnown RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 G2E3Q7L622 706 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 LLPHQ9BRT6 129 aaKnown RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 ZBED4O75132 1171 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 EEF1DP29692 281 aaKnown RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 C2orf54Q08AI8 447 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 BRDTQ58F21 947 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 CDC26Q8NHZ8 85 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 KIF9Q9HAQ2 790 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 SYF2O95926 243 aaKnown RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 LIG4P49917 911 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 PUM3Q15397 648 aaKnown RBP12.24□□□□□ -0.45
COL11A1-202ENST00000358392 NUDCD3Q8IVD9 361 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms